Sphingomonas sp. M1-B02: OKW87_00510
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Entry
OKW87_00510 CDS
T11063
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_00510 (radA)
DNA repair and recombination proteins [BR:
spmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OKW87_00510 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
DnaB_C
ChlI
RecA_N
Lon_C
AAA_16
AAA_22
Glyco_hydro2_C5
AAA_30
nSTAND_NTPase5
AAA
NACHT
AAA_5
nSTAND3
SLFN-g3_helicase
AAA_24
AAA_14
NTPase_1
AAA_29
Rad51
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
UZK66358
LinkDB
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Position
105429..106796
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AA seq
455 aa
AA seq
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MAKPQKRYVCQACGSVSSKWAGQCVDCSDWNTLVEDAGATVTPFMARHNLQSGGRAILLS
DLNTDIALPDRLATGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKISLRGEA
VAYVSGEEAADQVRLRARRLGLGNAPVRLAAATSVRDILTTLGEGPAPALVIIDSIQTMH
SDLIEGAPGTVSQVRASAGELIRFAKERGTAVVLVGHVTKDGSIAGPRVLEHMVDTVLAF
EGERSHQYRILRAVKNRFGGTDEIGVFAMQTEGLAEVGNPSSLFLTQRDESVTGTIVFPA
LEGTRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSACEVYLNV
SGGYRVQDPAADLAVAAALVSALAERPLAADAVAFGEIALSGEVRPVAHGALRCREAAKL
GFGRALAPAAQADAGGLQLAGFRNLGAFVDHLLGR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccccagaagcgctatgtctgccaggcctgcggctcggtttcgtccaaatgg
gcggggcagtgcgtcgattgttcggactggaacacgctggtcgaggatgccggggcgact
gtgacgccgttcatggcgcggcacaacctccagtcgggcgggcgcgcgatcctgttgtcg
gacctcaacaccgacattgccttgcccgatcgcctggcgacggggatcgccgagcttgat
cgggcgctggggggcgggttcgtggaaggatcggcgactttgatcggcggcgatccgggg
atcggcaaatcgaccctgctgctgcaggcggcggcgaagatctcgttgcgcggcgaagcg
gtcgcctatgtctcgggcgaggaagcggcggaccaggtaaggctgcgcgcgcggcggctg
gggctgggcaatgcgccggtgcggctcgcggcggcgacttcggtgcgcgatattctgacg
acgctgggggaggggccggcacccgcgctggtgatcatcgattcgatccagacgatgcat
tcggacctgatcgagggcgcgccggggacggtgagccaggtgcgggcgagcgcgggcgag
ctgatccgcttcgccaaggagcgggggaccgcggtggtgcttgtggggcatgtcaccaag
gacggcagcatcgccgggccgcgcgtgctcgagcatatggtcgacaccgtcttggccttc
gagggcgagcggagccaccagtatcggatcctgcgtgcggtgaagaaccgcttcggcggg
accgacgagatcggcgtgttcgcgatgcagaccgaggggctggcggaggtgggcaatccc
tcgtcgctgttcctgacccagcgcgacgagagcgtgaccggcacgatcgtgttcccggcg
ctggaggggacaaggccggtgctggtcgaggtgcaggcgctgacggtgcggctggcgtcg
ggcgcgacgccgcggcgcgcggtggtgggctgggacagcgggcggctggcgatggtgctg
gcggtgctggaggcgcgctgcgggctgagcttttcggcctgcgaagtctatctcaacgtt
tcgggcggctaccgggtgcaggatccggcggcggacctggcggtggcggcggccctggtc
tcggcgcttgccgagcggccgctggcggcggatgcggtggcgtttggcgagatcgcgcta
tcgggtgaagtgcggccggtggcgcacggcgcgctgcgctgtcgcgaggcggccaagttg
ggtttcgggcgcgcgctggcgcccgccgcgcaggccgacgcgggcgggctccagctggcg
gggtttcgcaatttgggggcgttcgtggatcatctgctggggcggtga
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