Sphingomonas sp. M1-B02: OKW87_00990
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Entry
OKW87_00990 CDS
T11063
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00230
Purine metabolism
spmb01100
Metabolic pathways
spmb01120
Microbial metabolism in diverse environments
spmb01232
Nucleotide metabolism
Module
spmb_M00958
Adenine ribonucleotide degradation, AMP => Urate
spmb_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OKW87_00990 (xdhB)
Enzymes [BR:
spmb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
OKW87_00990 (xdhB)
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GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
UZK66447
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All DBs
Position
complement(193489..195768)
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AA seq
759 aa
AA seq
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MSDRLGAPRHDSADLHVAGTAFYVDDLPEPPGLLHCAFGHASDGHARILSLDLDAVRAAP
GVVAVFTAADIPGVNDVSPVKGDDRLLAEGEILYPGQPLFLVAATSTRAARRAARLSKVE
VDPLPALVTIADARAADNSIEPTQRMARGDAAAALAAAPHRLSGSIEMGGQEHFYLEGQA
ALATPGEQNELHILSSTQHPSEIQHLIAKLLGRSHADITVEVRRMGGAFGGKETQAAAFA
AACALVAARTGRPAKFRADRDDDMVATGKRHEFAIRYDVGFDGEGRIEGIRLELASRCGA
TTDLSPAINDRAMFHADNSYFLPAVEIVSHRLKTHTVSNTAFRGFGGPQGMMGIERVMDA
IADKLGLDPLAVRQANLYGPGRDVTPYHMQVEDNVAPELIAELAASAGYAERRNAVAAFN
ATNRIHKKGLALTPVKFGISFTTTHLNQAGALVLVYADGSIHSNHGGTEMGQGLHIKIAQ
IVANVFAVPVETVKVSATRTDKVPNTSATAASSGADLNGMAARNAALAIRERLEAFGAQK
YGTGIRFTPEGVIAGDETIPFPDFCRMAHLNRIALSATGFYATPKIHYDRTTHSGRPFLY
FAYGAALSEVMIDTLTGEHRVLAVDILHDVGRSLNAAIDLGQIEGGFIQGMGWLTTEELV
YDARGRLLTHAPSTYKIPTANDRPDQMRIAIWEAGRNAEETIHRSKAVGEPPFMLAISVF
SALTQAVAAAAPGKGLPALDAPATPERILAAIEELRARD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcctgggcgccccccgccacgacagcgccgacctccacgtcgccggcacc
gctttctatgtcgatgatctgccggagccccccggcctgctccactgcgccttcggacat
gcaagcgacggccatgcccggatcctgtcgctcgatctcgacgcagtccgcgccgcgccc
ggcgtcgtcgccgtgttcaccgccgccgacatccccggcgtcaacgacgtcagcccggtc
aagggggacgaccgcctgcttgccgagggcgaaatcctctaccccggccagccgctcttc
ctggtcgccgcgaccagcacccgcgccgcccgccgcgccgcgcgccttagcaaggtcgag
gtcgaccccctccccgctctggtcaccatcgccgacgcccgcgcggcggacaacagcatc
gagcccacccagcgcatggcccgcggcgatgccgccgccgcgctcgccgccgcgccgcat
cgcctctcgggcagcatcgagatgggcgggcaggagcatttctacctcgagggccaggcc
gcgcttgccacccccggcgagcagaacgagctgcacattctcagttccacccagcatccg
agcgaaatccagcacctgatcgccaagctgctcggccgcagccatgccgacatcaccgtc
gaagtccgccgcatgggcggcgcgttcggcggcaaggagacgcaggcggccgcctttgcc
gccgcctgcgcgctggttgccgccaggaccggccgccccgccaagtttcgcgccgatcgc
gacgacgatatggtcgccaccggcaagcgccacgaattcgcgattcgctatgacgtcggc
ttcgacggcgaaggccggatcgaaggcatccgcctcgaactcgcctctcgctgcggcgcc
accaccgatctctcccccgcgatcaacgatcgcgcgatgttccatgccgacaacagctac
ttcctccccgcggtcgaaatcgtcagccaccggctcaagacccacaccgtctccaacacc
gccttccgcggcttcggcgggccgcaggggatgatggggatcgagcgggtgatggacgcc
atcgccgacaagctgggtctcgatccgctcgcggtacgccaggccaatctctatggcccc
ggccgcgacgtcaccccctatcacatgcaggtcgaggacaatgtcgcccccgaactgatt
gccgaactcgcggcaagcgccggctatgccgagcgccgcaacgcggtggccgcgttcaac
gccaccaaccgcatccacaagaagggcctcgcgctcaccccggtgaagttcgggatcagc
ttcaccaccacccatctcaaccaggccggcgcgctcgtcctggtctatgccgacggctcg
atccattcgaaccatggcggcaccgaaatgggccagggcctccacatcaagatcgcccag
atcgtcgcaaacgtcttcgcggtgccggtcgaaacggtgaaggtctccgccacccgcacc
gacaaggttcccaatacctccgccaccgccgcctcctcgggcgcggacctcaacggcatg
gccgcacgcaacgccgcgctggcgatccgcgagcggctcgaagccttcggcgcgcagaaa
tatgggaccgggatccgcttcacccccgagggcgtgatcgcgggcgacgagaccatcccc
ttccccgatttctgccggatggcgcacctcaaccgcatcgcgctctcggccaccggcttc
tacgccacgccgaagatccactatgaccgcaccacgcacagcggccgccccttcctctat
ttcgcctatggtgctgcgctcagcgaagtgatgatcgacacgctgaccggcgagcatagg
gtgctcgcggtcgacatcctccacgacgtcggccgctcgctcaatgcggccatcgacctt
ggccagatcgagggcggcttcatccagggcatgggttggctgacgaccgaggagctggtc
tacgacgcgcgtggccggctgctcacccacgccccctcgacctacaagattcccaccgcc
aacgatcgccccgatcagatgcggatcgcgatctgggaagccgggcgcaacgccgaggag
acgatccaccgttccaaggccgtcggcgaaccgcccttcatgctcgccatctcggtgttc
agcgcgctcacccaggcggtggccgccgcagcgcccggcaagggtctacccgcgctcgac
gccccggcaacgcccgaacgcatcctcgccgcgatcgaagaactgcgcgcccgtgactga
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