Sphingomonas sp. M1-B02: OKW87_02905 Help Entry OKW87_02905       CDS       T11063                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism spmb  Sphingomonas sp. M1-B02 Pathway spmb03018   RNA degradation Brite KEGG Orthology (KO) [BR:spmb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     OKW87_02905  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:spmb03019]     OKW87_02905 Messenger RNA biogenesis [BR:spmb03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      OKW87_02905 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL RNase_J_C Anti-Pycsar_Apyc1 RsbRD_N Motif Other DBs NCBI-ProteinID:  UZK67883 LinkDB All DBs Position 587384..588961 Genome browser AA seq 525 aa AA seqDB search MNVNLYGTQGKWLMVDCGITFGDADYPGVDVILPDLQFIEERLDDLVGIVLTHGHEDHIG ALPYLAADLGVPLYATPFTAGLIRGKLEEEGNDDRITLKMIQEGEAFRVGPFGITYVPLA HSIPEANALLIETPYGKIFHTGDWKLDPAPSLGGASTAEELSAIGDEGVLALVCDSTNVF NPEASGSEADVREGLREVIAAAKGRVMVTTFASNAIRLQTLGEVARDSGRELCVAGRSLD RIIRVAKATGYLRDLPDTIDFDTAMTLPPSRVLIVATGGQGEPRAALARVAEGSHVIKLG KGDTVVFSSRQIPGNEVAIGRIMNKLAKSDVSIVTERQAFIHVSGHPGRPELASMYGWIR PDILVPVHGETRHLHEHRRFGLEQGIPTALVQENGEVWRLAPGAPQRIAEAPTGRLVLDG DVILPADGSTINERRRLALYGQVSVAVAIRGGRLAGSPVVRVQGIPVEEDRDEFLDEAAS AAAAAVKKDGRNMDKLREAVRLAVRRVATRFTGKKPIVDVLIVEI NT seq 1578 nt NT seq  +upstreamnt  +downstreamnt atgaacgtcaatctctacggcacgcagggcaagtggctgatggtcgattgcggcatcacc tttggcgacgccgattatccgggcgtcgacgtgatcctgcccgacctgcagttcatcgaa gaacggctcgacgatctggttggcatcgtgctgacgcatggccatgaggaccatatcggt gcgctgccctatctcgccgccgatctgggcgtgccgctttacgccacgccgttcacggcg gggctgatccgcggcaagctggaggaagagggcaatgacgatcgcatcaccctgaagatg attcaggaaggcgaggcgtttcgcgtcgggcccttcgggattacttacgtgccgctcgca cactcgatccccgaggccaatgcgctgctgatcgagacgccctatggcaagatcttccac actggcgactggaagctggacccggcgccttcgctgggtggtgcttcgaccgctgaggag ctgagcgcgatcggtgacgagggcgtgctcgcgctggtctgtgattcgaccaacgtgttc aatcccgaggcttcggggtcggaggcggatgtgcgcgaggggcttcgcgaggtcatcgcc gccgccaagggccgagtgatggtaacgaccttcgcgtccaacgcgatccggctgcagacg ctgggcgaagtggcgcgcgactcggggcgcgagctttgcgtggcggggcgctcgctcgat cggatcatccgcgtcgccaaggcgaccggctatctgcgcgaccttcccgacacgatcgat ttcgacacggcgatgacgctgccgccgtcgcgcgtactgatcgtcgcgaccggcgggcag ggcgagcctcgcgcggcgctggcccgcgttgccgagggcagccatgtcatcaagctcggt aagggcgataccgtcgtcttttcctcgcgccagatccccggcaatgaagtcgcgatcggg cggatcatgaacaagctcgccaagagcgacgtctcgatcgtcaccgagcggcaggcgttc atccacgtctcgggccatcccgggcgtcccgagcttgcgtcgatgtatggctggatccgg cccgatatcctggtcccggtgcatggcgagacccggcatctgcacgaacatcgccgcttc gggctcgagcagggcatcccgacggcgctggtccaggagaatggcgaagtctggcggctt gctccgggcgcaccgcagcgcatcgccgaggcgccgaccggacggctggtgctcgacggc gatgtgattcttcccgccgatggatcgacgatcaacgaacggcggcgcctcgcgctctac ggccaggtttcggtggcggtggcgatccgcggcggccggttggcgggatcgccggtcgtg cgggtccagggcatacccgtggaagaggatcgcgacgagtttctcgatgaagcggcaagc gcggcggcggcggcggtcaagaaggacgggcgtaacatggacaagctgcgcgaggcggtg cggctcgcggtacgccgcgtggcgacccgcttcacgggcaagaagccgatcgtcgacgtg ttgatcgtggaaatctga

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