Sphingomonas sp. M1-B02: OKW87_02985
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Entry
OKW87_02985 CDS
T11063
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00220
Arginine biosynthesis
spmb00240
Pyrimidine metabolism
spmb00250
Alanine, aspartate and glutamate metabolism
spmb01100
Metabolic pathways
spmb01110
Biosynthesis of secondary metabolites
spmb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
OKW87_02985 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
OKW87_02985 (carB)
00220 Arginine biosynthesis
OKW87_02985 (carB)
Enzymes [BR:
spmb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
OKW87_02985 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
RimK
CoA_binding_2
ATP-grasp_5
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
UZK66820
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Position
604654..607983
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AA seq
1109 aa
AA seq
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MPKRTDISSILVIGAGPIIIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPEL
ADATYVEPITPEIVAKIIAKERPDAILPTMGGQTALNTALALANDGTLEKYGCIMIGADA
EAIDKAEDRLKFKDAMTRIGLESARSHIAHTEAEALEGLDYVGLPAIIRPSFTMGGSGGG
IAYNREEFLGIVRSGLDLSPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIVCSIENIDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQYAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAENTLGTAMKSVGEVMAIGRSIHESLQKALRGLETGLSGFNQVDRLVGAPRD
EIEAALAERTPDRLLIAAQALREGFTVPEIHALTRFDPWFLERIAEIVAAEEVVCRGGLP
QDAAGMRRLKAMGFSDKRLAYLALKSLNLREGSGAMARSHGLIGDVARMMTGGVTETDVR
ALRHKLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPSFGAPESESEPTDRRKIVILGGGP
NRIGQGIEFDYCCCHACFALADAGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDVLEV
LDVEKSNGTLVGVIVQFGGQTPLNLAQALEDAGIPILGTSPDAIDLAEDRERFAAMVSKL
GLRQPLNGLARSRDEAVAAAERIGFPVLMRPSYVLGGRAMEIVDTLQQLDDYIQTAVQVS
GDSPVLIDQYLRDAIEVDVDAICDGTDVVVAGVLQHIEEAGVHSGDSACSIPPYSLSPEI
IAEIERQTEALAHALSVVGLMNIQFAVKDGLVYLIEVNPRASRTVPFVAKAVGVPIAKIA
ARVMAGEKLAHLPKIDRHIDHIAVKEAVFPWSRFPGVDPVLSPEMHSTGEVMGIDSDFAT
AFAKSQLGAGTVLPLAGTLFVSVKESDKPVVLPGVRILAVLGFTIVATSGTADYLEAEGI
AIERVNKVAQGRPHIVDRIQDGRVDIIFNTTEGWQSLKDSSSIRKTAMGQKVPYFTTAAA
SVAAARAIESLRTKPLEVRPLQDFYAARD
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatctcctcgatcctcgtcatcggcgcggggccgatcattatc
ggccaggcgtgcgaattcgattattcgggcacgcaggcgatcaaggcgctcaaggaggag
ggctatcgcatcgtcctggtcaattcgaacccggcgacgatcatgaccgatcccgaactg
gccgacgcgacctatgtcgagccgatcacgcccgagatcgtcgccaagatcatcgcgaag
gagcgccccgacgcgatcctgccgacgatgggtgggcagaccgcgctcaacaccgcgctg
gcgctggcgaacgacggcacgctggaaaagtacggctgcatcatgatcggtgcggacgcc
gaggcgatcgacaaggccgaggaccggctgaagttcaaggatgcgatgaccaggatcggg
ctggagagcgcccgttcgcatatcgcccacaccgaagccgaggcgctggaggggctggac
tatgtcgggttgccggcgatcatccggccgagcttcacgatgggcggatcgggcggcggg
atcgcctataatcgcgaggaatttctggggatcgtccgctcggggctcgatctctcgccg
accaccgaagtgctgatcgaggagtcgctgctcggttggaaggaatatgagatggaggtc
gttcgggacaggaacgacaattgcatcatcgtctgctcgatcgagaatatcgatccgatg
ggcgtccataccggcgattcgatcacggtcgcgcccgcgctgacgctgaccgacaaagaa
tatcagatcatgcgcaacgccagcatcgcggtgctgcgcgagatcggcgtcgagacgggc
ggatcgaacgtccaatatgcggtcaatccgaaagacggccggctgatcgtcatcgagatg
aacccccgcgtctctcgctcgtcggcgctggcttccaaggctaccggcttcccgatcgcc
aaggtcgcggcgaagctggcggtgggatacacgctcgacgagattacgaatgacattacc
ggtgcgacccccgcgagcttcgagccgacgatcgactatgtcgtcaccaagatcccgcgc
ttcgccttcgagaagttcaagggcgccgaaaacaccctcggcaccgcgatgaagtcggtc
ggcgaggtgatggcgatcgggcgttcgatccatgagagcctgcagaaggcgctgcgcggg
ctcgagaccgggctttcgggcttcaaccaggtcgaccggctggtcggcgcgccgcgcgac
gagatcgaggcggcgctggccgagcggacgccggaccggctgctgatcgcggcacaggcg
ctgcgcgagggcttcaccgtgcccgaaatccatgcgctgacgaggttcgacccctggttc
ctcgagcggatcgccgagatcgtcgctgccgaggaagtcgtgtgccgcggcgggctgccg
caggatgccgcgggcatgcgccggctcaaggcgatgggcttcagcgacaagcgcctcgcc
tatctcgcgctcaaatcgctgaacctgcgcgagggcagcggggcgatggcgcgcagccac
gggctgatcggcgacgtcgcgcggatgatgaccggcggcgtgaccgagaccgacgtgcgc
gcgctgcgccacaagcttggcgtacggcccgtgttcaagcggatcgacacctgcgcggcc
gagttcgaggcgaagacgccttatatgtattcgacctatgaagcgccgagcttcggcgcg
cccgagagcgagtccgagccgaccgatcggcgcaagatcgtgatcctgggcggcgggccg
aaccggatcgggcaggggatcgagttcgattattgctgctgccacgcctgcttcgcgctg
gcggatgcgggctatgagacgatcatgatcaactgcaatccggagacggtgagcaccgat
tacgacacgtccgaccggctctatttcgagccgctgaccgccgaggatgtgctcgaggtg
ctcgacgtcgagaagtcgaacggcacgctggtgggggtgatcgtccagtttggcgggcag
accccgctcaacctggcgcaggcgctggaggatgcggggatcccgatcctgggcacctcg
cccgatgcgatcgacctggcggaggatcgcgagcgcttcgccgcgatggtttccaagctc
gggctgcgccagccgctcaacgggctggcgcgcagccgcgacgaggcggtggcggcggcg
gagcggatcggcttcccggtgctgatgcggccttcctatgtgcttgggggccgggcgatg
gagatcgtcgatacgctccagcagctcgacgattatatccagaccgcggtgcaggtctcg
ggcgactcacccgtgctgatcgaccaatatctgcgcgacgcgatcgaagtcgatgtcgac
gcgatctgcgacggcaccgacgtggtggtcgccggcgtgctccagcatatcgaggaagcc
ggggtgcattcgggcgacagcgcctgctcgatcccgccttattcactgagccccgagatc
atcgccgaaatcgagcgccagaccgaggcgctggcgcatgcgctgtcggtcgtcgggctg
atgaacatccagttcgcggtgaaggacgggttggtctatctgatcgaggtcaatccgcgc
gcgagccggacggtgccgttcgtggcgaaggcggtcggggtgcccatcgccaagatcgcg
gcgcgggtgatggccggcgagaagctggcgcatctgcccaagatcgaccggcacatcgat
catatcgcggtgaaggaagcggtgttcccctggtcgcgctttccgggcgtcgatccggtg
ctctcgcccgaaatgcattcgaccggcgaagtgatggggatcgacagcgatttcgcgacc
gccttcgccaagtcgcagctgggggcggggacggtgctgccgctcgccggcaccctgttc
gtcagcgtcaaggagagcgacaagccggtggtgctgccgggggtgcggatccttgccgtg
ctgggcttcacgatcgtcgcaacgagcgggaccgccgactatctcgaggccgagggtatc
gcgatcgagcgcgtgaacaaggtggcgcaggggcggccgcatatcgtcgaccgcatccag
gacggtcgcgtggatatcatcttcaacaccaccgagggctggcagtcgctcaaggacagt
tcgagcatccgcaaaaccgcgatggggcagaaagtgccctatttcacgacggcggcggcg
agcgtggcggcggcgcgggcgatcgaatcgctgcggacgaagccgcttgaggtgcgcccg
ttgcaggatttctacgcggcgcgggattaa
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