Sphingomonas sp. M1-B02: OKW87_03405
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Entry
OKW87_03405 CDS
T11063
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spmb03009
]
OKW87_03405
Enzymes [BR:
spmb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
OKW87_03405
Ribosome biogenesis [BR:
spmb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OKW87_03405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UZK66894
LinkDB
All DBs
Position
complement(684314..685705)
Genome browser
AA seq
463 aa
AA seq
DB search
MPPSNAKESQRIAKLLARAGIASRREIERMIADGRIALNGVVLDTPATLLTSLEGVTVDG
NPVEAPEPARLFRYHKPAGLLTAERDFTGRPTIYDRLPPGLPRVIPVGRLDLGTEGLLLL
TTDGELKRELELPSTGVERSYRARAYGHVTQAQLEELMLGVEIEGVRYGSINANIERRTG
ANLWIEMTLTEGKNREVRRVLEHLGLQVSRLIRTRYGPFYLGDLPIGDVDEIRASDLNTF
RTVLSKPGGGKAASNLQFAVRARVVASPAPRPEPVRPGPRREPERSATRAAGAARHSTPR
PEAPGGEARFPTRVAPNHSDAPREEVPRRGPLVGKPFGSSGENRFPKRTVVPRQERLARA
EAPARRGAGCNAPAEASDAPRPDRKEARFTPRVTPGRADPGRPARSEAIEKPARAARARA
HRDTQEPRSGEIGDGPRKLPRTRGPSDGRGKPAKPKRPTRSRK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccgtccaacgccaaagaatcgcagcgcatcgcgaagctgctcgcccgtgccgga
atcgcgtcgcgtcgcgaaatcgaacgcatgatcgccgatgggcgcatcgcgctcaacggc
gtcgtgctcgatacccccgccactcttctcacctcgctcgaaggcgtcaccgtcgacggc
aatccggtcgaggcgcccgagccggcgcggctgttccgctatcacaagcccgccgggctg
ctgaccgccgagcgcgacttcaccggaaggccgacgatctacgatcgcctgcccccgggc
ctaccccgcgtgatcccggtcggaaggctcgatctgggcaccgaggggctgctgctcctc
accaccgacggcgaactcaagcgcgagctcgaactgccgtcgaccggcgtcgagcgcagc
tatcgcgcccgcgcttatggccatgtcacccaggcccagctcgaggaactgatgctcggc
gtcgagatcgagggcgtccgctacggatcgatcaacgccaatatcgagcggcgcaccggc
gccaatttgtggatcgagatgacgctgaccgagggcaagaaccgcgaagtccgccgcgtg
ctcgaacatctcggcctccaggtcagccgcttgatccgcacccgctacgggcccttctat
ctcggcgatcttccgatcggcgacgtcgacgagatccgcgcgagcgatctcaacaccttc
cgcaccgtgctgagcaagcccggcggcggcaaggcggcgtcgaacctgcaattcgcggtc
cgcgcccgcgtcgtcgcctcgcccgcgcccaggcccgagccggtccgccccggcccgcgc
cgcgagcccgagcgttcggcgacccgcgccgccggtgccgcccgccactcgacgccgcgt
cccgaagcgcccggcggcgaagcacgcttccctacgcgcgttgctccgaatcacagcgat
gctccgcgcgaggaagtcccccgccgcggcccgctcgtcggcaagcccttcggcagctcg
ggcgagaatcgcttccccaagcgaaccgtcgtcccccgtcaggaacggctcgcccgggcc
gaagcccccgcgcgccgcggcgccggctgcaacgcccccgccgaagcgagcgatgcgccg
cgtccagatcgcaaggaagcccgcttcaccccgcgcgtgactccgggccgcgccgatccc
ggccgtcccgcgcgcagcgaggcgatcgagaagcccgcccgcgccgcccgcgcccgcgcg
catcgcgacacgcaggaaccccgctcgggcgagatcggcgacggaccgcgcaagctcccg
cgcacccgcggcccttcggacggtcgcggcaagcccgccaagcccaagcgcccgacccgg
tcgcgtaaataa
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