Sphingomonas sp. M1-B02: OKW87_03530
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Entry
OKW87_03530 CDS
T11063
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OKW87_03530 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spmb01007
]
OKW87_03530 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spmb03016
]
OKW87_03530 (aspS)
03029 Mitochondrial biogenesis [BR:
spmb03029
]
OKW87_03530 (aspS)
Enzymes [BR:
spmb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
OKW87_03530 (aspS)
Amino acid related enzymes [BR:
spmb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OKW87_03530 (aspS)
Transfer RNA biogenesis [BR:
spmb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OKW87_03530 (aspS)
Prokaryotic type
Other AARSs
OKW87_03530 (aspS)
Mitochondrial biogenesis [BR:
spmb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OKW87_03530 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
UZK67892
LinkDB
All DBs
Position
708736..710532
Genome browser
AA seq
598 aa
AA seq
DB search
MHAYRTHNCAELRDTHVGQEVRLSGWVHRKRDHGDLVFIDLRDHYGITQIVTDISGPAFE
AIESLRSESVVTVTGKVVARDESVVNPNLPTGAVEVRVADVVVQSAAQELPLPVFGEAEY
PEEIRLRYRYLDLRRERLHKNIMLRSNVIASLRRRMIDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFAAIEPVLHGVFEEFADWEGKGRSVSALPFKRIPYRESMLKYGNDKPDLRN
PILISDVSEHFKGSGFSRFASMVEEGSVVRAIPAPNTHEKSRKFFDDMNSWAQSEGFPGL
GYATQKDGVFGGPIANNHGQEGMKAIADALGLGPNDGIFFAAGKEAQAAKLAGLARTRAA
EQLELVDQSRFEFCWIVDFPMFEYDEDAKKVDFSHNPFSMPQGEMEALTTKDPLDILAYQ
YDIVCNGVELSSGAIRNHKAEIMYKAFEIAGYTQAQVDSDFAGMINAFKFGAPPHGGSAP
GVDRIVMLLAGEPNIREVVVFPMNQRAEDLMMQAPAEVSPRQLKELSIKLASDGPKAG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacccataattgcgccgaactgcgcgacacccatgtcggccaggaa
gtgcgcctctcgggctgggtgcatcgcaagcgcgatcatggcgatctggtcttcatcgac
ttgcgcgaccattatggcatcacccagatcgtcaccgacatcagcggcccggcgttcgaa
gccatcgagtcgctgcgcagcgaatcggtggtgacggtgaccggcaaggtcgtcgcgcgc
gacgagagcgtggtgaacccgaacctgccgaccggcgccgtggaagtccgcgtcgccgat
gtcgtcgtccagtccgcggcgcaggagctgccgcttcccgtgttcggcgaggccgaatat
ccggaggaaatccgcctccgctatcgctatctcgatctgcgccgcgagcggctccataag
aatatcatgctgcgatcgaacgtcatcgcgtcgctccgccgtcggatgatcgaccagggc
tttaccgaattccagaccccgatcctcaccgcgagcagccccgagggcgcgcgcgactat
ctcgtccccagccgcgtccatcccggcaaattctatgcgctcccccaggcgccgcagatg
ttcaagcagctgctgatggtcgcgggcttcgatcgctatttccagatcgccccttgcttc
cgcgacgaggatgcccgcgccgatcgtagcccgggtgaattctaccagctcgatttcgag
atgagcttcgtcacgcaggacgatgttttcgcagcgatcgagccggtgctccacggcgtg
ttcgaggaattcgccgattgggaagggaagggccgcagcgtctccgcattgccgttcaag
cgcattccgtaccgtgaatcgatgctgaaatacggcaacgacaagcccgatctgcgcaac
ccgatcctgatcagcgacgtctccgagcatttcaagggctcgggcttcagccgcttcgcc
tcgatggtcgaagaaggcagcgtcgtccgcgccatccccgcgcccaatacccacgagaag
agccggaagttcttcgacgacatgaacagctgggcgcagagcgagggcttcccgggcctc
ggctatgccacccagaaggacggcgtgttcggcggcccgatcgccaacaatcacggccag
gaggggatgaaggcgatcgccgacgcgctcggtctcggcccgaacgacggcatcttcttc
gccgcgggcaaggaagcgcaggccgccaagctcgccggcctggcgcgtacccgcgccgcc
gagcagctcgaactggtcgaccagagccgctttgaattctgctggatcgtcgatttcccg
atgttcgaatatgacgaggacgccaagaaggtcgatttcagccacaaccccttctcgatg
ccgcagggcgagatggaggcgctgacgaccaaggacccgctcgacatcctggcctatcaa
tatgacatcgtctgcaacggcgtggagctgagctcgggcgcgatccggaaccacaaggcc
gagatcatgtacaaggcgttcgagatcgccggctacacgcaggcgcaggtcgacagcgac
tttgccggcatgatcaacgccttcaagttcggcgcgcccccgcatggtggctcggcgccg
ggggtggatcggatcgtgatgctgctcgcgggcgagccgaacattcgtgaggtcgtggtc
ttcccgatgaaccagcgggcggaggatctgatgatgcaggcgccggccgaggtgagcccg
cggcagttgaaggaactgagcatcaagctggcgagcgacggcccgaaggcggggtag
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