Sphingomonas sp. M1-B02: OKW87_03680
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Entry
OKW87_03680 CDS
T11063
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spmb03029
]
OKW87_03680 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spmb02000
]
OKW87_03680 (bamA)
Mitochondrial biogenesis [BR:
spmb03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
OKW87_03680 (bamA)
Transporters [BR:
spmb02000
]
Other transporters
Pores ion channels [TC:
1
]
OKW87_03680 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
UZK67894
LinkDB
All DBs
Position
complement(737225..739966)
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AA seq
913 aa
AA seq
DB search
MLSSMTAAAYAQTAPAQTAPAPAPGATPPAGAPNATQPQTAAPPVAPQVARPIRSIRVEG
SQRLEPDTVLSYTRLRTGGTYTNETIDQALKDLLASELLADVAIEGVETGDLIIRIRESP
VINRIIYEGNKRLKNDKIEKEVKLAPRQIFTRTAVRADVARIVELYRRQGRFAAQVEPKM
VSLDQNRVDVVFEINEGPKSKVRQINVIGNEVFSDGKLRGEMATKQARITSLFSSNTTYD
QDRLAYDQQKLRQFYLTEGYADFRVISAVAELTPDKRDFIITYVVEEGPRYKFGPVTVDS
AIRDFDDKRLASALAIKEGNWYNAKLVEDTVEQLSETAGAFGYAFAEVKPDFQRDREALT
MSMSFNIAETNRTYIERIDITGNRQTQDKVIRREFRVAEGDAFNTFLVKRSQDRINSLGY
FQDKFEIERKEGSAPDRIVLAANVEERPNGQLTLSAGFSSLERFILQASIRQGNFRGMGQ
TVSASVDYSSYSKSVELGFTEPYVFNSNVALGATLFRQDYNAFNYIGSDRNTTYSQVATG
FQLVAGVPLTEYWTLSGRYTLRQDDVTLDQSSFFTNGVCDPLKAGRYYCEAVGNRITSLV
GVSLIYDSLNSRLRPTRGQRLTVGGDFAGLGGEVRYLRARANGEKYFNVGSGFIFSVSAE
GGYIHSLEKTGAGIDPVRITDRFYLGEPQFRGFDIRGVGPRVQRIAFTGSALDGTQALIT
DREQIIDDALGGKAYYITKAELEIPLGAGAAELGLRPSIFVMAGSLFNITRPGLTINFPQ
ARDASGALLFNKDGSPTLLPADNFQKDAAGNQYYLVGAGDSVNAGAATTCTVGYSATPGG
PCVGTSVNTIYNIPTAAFFERFVGDSPKPRLSIGVGVNWNSPFGPLRIDVAKALLSQPGD
DTKLITFNVGTQF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgagcatgacggctgcggcttatgcgcagaccgcccccgcccaaacggcgccc
gcacctgctcccggggcgacgccgcctgccggcgcgccgaatgccacccagcctcagacg
gccgcgcccccggtcgccccgcaggtggcacgccccattcgctcgatccgcgtcgaggga
tcgcagcggctcgaacccgacaccgtgctgtcctacaccaggctgcgcaccggcggcacc
tacaccaacgagacgattgatcaggcgctcaaggacctgctcgcgtccgagctgctggcc
gacgtcgcgatcgagggtgtcgagaccggcgacctcattatccgcatccgcgaaagcccg
gtgatcaatcgcatcatctatgagggcaataagcgcctcaagaacgacaagatcgagaag
gaagtgaagctggcgccgcgccagatcttcacacgcaccgcggttcgcgcagacgtcgct
cgcatcgtcgagctctatcgccgacagggccgtttcgccgcgcaggtcgagccgaagatg
gtcagcctggaccagaaccgtgtcgacgtggtgttcgagatcaacgaagggccgaagtcc
aaggtccgccagatcaacgtgatcggcaacgaagtcttttcggacggaaagcttcgcggc
gagatggcgaccaagcaggcgcgcatcacctcgctgttcagctcgaacacgacctatgac
caggatcggctggcctacgaccagcagaagctgcgccaattctacctgaccgaaggctat
gccgatttccgggtgatttccgcggtcgccgagctcacgccggacaagcgcgatttcatc
atcacttacgtagtcgaggaaggcccgcgctacaagttcggcccggtcaccgtcgacagc
gcgatccgcgatttcgacgacaagcgcctcgcctcggccttggcgatcaaggagggtaat
tggtacaatgccaagctcgtcgaggacacggtcgagcagctgagcgagaccgcgggcgcg
ttcggctatgccttcgccgaggtgaagcccgatttccagcgcgaccgcgaagcgctgacc
atgtcgatgagcttcaacatcgccgagacgaaccgcacctatatcgagcggatcgacatc
accggcaatcgccagacgcaggacaaggtcatccgccgcgaattccgcgtggcggaaggc
gacgccttcaacaccttcctggtcaagcgctcgcaggaccggatcaattcgctcggctat
ttccaggacaagttcgagatcgagcgcaaggaaggttcggcccccgatcgcatcgttctt
gccgcgaatgtcgaggaacggcccaacggccagctgaccttgtcggcgggcttctcgagc
ctggagcgcttcatcctccaggcgtcgatccgccagggcaatttccgcggcatgggccag
acggtgtcggcctcggtcgattattcgagctattcgaagtcggtcgagctcggtttcacc
gagccttatgttttcaatagcaacgtggcgctgggcgcgacgctgttccgccaggattac
aacgcgttcaactatatcggcagcgatcgcaacacgacctacagccaggtcgcgaccggc
ttccagctcgtcgcgggcgtcccgcttaccgaatattggacgctgtccggccgctacacg
ctgcgccaggacgacgtgacgctcgaccagtcgagcttcttcaccaacggcgtctgcgat
ccgctcaaggcgggccgttattattgcgaggcggtgggcaatcgcatcacttcgctggtc
ggcgtctcgctgatctatgacagcctcaacagccgcctgcgcccgacgcgtggccagcgc
ctgaccgtcggcggcgactttgccggtctgggcggcgaggttcgctaccttcgcgctcgc
gccaacggcgagaaatatttcaacgtcggcagcggcttcatcttctcggtctcggccgag
ggtggctatatccacagcctggaaaagaccggggcagggatcgatccggtccggattacc
gatcgcttctatctgggcgagccgcagttccgcggcttcgatattcgcggcgtcggcccc
cgagtccagcgtatcgccttcaccggcagcgcgctcgacggcacccaggcgctgatcacc
gatcgcgagcagatcatcgacgatgcgctgggcggcaaggcctattacatcaccaaggca
gagctcgagattccgctcggcgccggtgcggccgaactgggtctgcggccgtcgatcttc
gtgatggcgggcagcctgttcaacatcacgcgtcccggtctgacgatcaacttcccgcag
gcgcgcgatgcgtcgggcgcgctgctgttcaacaaggacggctcgccgaccttgttgccc
gcggacaatttccagaaggatgccgccggcaaccaatattatctcgtcggcgccggcgac
tcggtcaatgccggggcggcgaccacctgcaccgtcggctactcggcgacgccgggtggg
ccctgcgttggcacttcggtcaataccatctataacatcccgacagcggccttctttgag
cgcttcgtcggagactcgccgaaaccgcgcctgtcgatcggtgtcggcgtcaactggaat
tcgccgttcggcccgctgcgcatcgatgtggccaaggcgctgctttcgcagcccggcgac
gacaccaagctcatcacgttcaacgtagggactcagttctaa
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