Sphingomonas sp. M1-B02: OKW87_03990
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Entry
OKW87_03990 CDS
T11063
Name
(GenBank) response regulator transcription factor
KO
K07667
two-component system, OmpR family, KDP operon response regulator KdpE
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb02020
Two-component system
spmb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OKW87_03990
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OKW87_03990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spmb02022
]
OKW87_03990
Two-component system [BR:
spmb02022
]
OmpR family
KdpD-KdpE (potassium transport)
OKW87_03990
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
UZK66999
LinkDB
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Position
complement(803388..804074)
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AA seq
228 aa
AA seq
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MSPHANILVVDDEPAIRRLLNASLARGGYRVVEAGNAREALSAMQIDKPEAVLLDLGLPD
RDGLELIALIKASGAAVIVISARAATAEKVSALDLGADDYVTKPFDTEEVLARVRTALRH
RLASEIDAPTVRLGDIEIDLAARLVRKDGSEVRLTPKEFGFLAELAKHPGRVVTHVQLLR
SVWGQGHERDVEYLRVAARGVRKKLEGGAGPSFIRNEPGVGYRLMISP
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcatgccaacatcctggtagtcgacgacgaacccgcgatccggcggctgctg
aacgccagcctggcgcgcggcggctaccgcgtggtcgaggccggcaacgcccgcgaagcg
ctcagcgcgatgcagatcgacaagcccgaggcggtgctgctcgatctgggtctgcccgat
cgcgatgggctggagttgatcgcgctgatcaaggcgtccggagcagcggtgatcgtcatt
tctgcgcgcgccgcgactgccgaaaaagtgagcgcgctggaccttggcgcggacgattat
gtcaccaagcccttcgacaccgaagaggtgcttgcacgagtgcgaaccgcgttgcggcat
cggcttgcgtccgagatcgatgctccgacggtccggctgggagacatcgagatcgacctc
gcggcgcggctggttcggaaagacgggagcgaggttcgcctcacgccgaaggagttcggg
ttcctggccgagcttgcgaaacacccgggcagagtggtcacgcatgttcaactgttgcgc
agtgtctggggccaggggcacgagcgcgacgtcgaatatctgcgcgtggccgcgcgcggt
gtccgcaagaagctcgagggtggggcggggccgtcgttcatccgcaacgaacccggggtc
ggctacaggctgatgatttcgccctga
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