Sphingomonas sp. M1-B02: OKW87_04775
Help
Entry
OKW87_04775 CDS
T11063
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_04775 (addB)
Enzymes [BR:
spmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OKW87_04775 (addB)
DNA repair and recombination proteins [BR:
spmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OKW87_04775 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
UZK67149
LinkDB
All DBs
Position
complement(994448..997381)
Genome browser
AA seq
977 aa
AA seq
DB search
MPERPHLYTIPPHRAFADALAIGLIRRFGGDPLRLARGTVLLPNNRAKRSIQDAFVRASA
GGLLLPRLVAVGDPELDEALFDSDEGEPIPAAVDPLQRRMILARLIQESGSPVDAAEAVR
LAGDLAATLDQLLIEEVAPTKLRELELTQELSAHWERSLALFEVVLERWPRELARLGRID
LAERRTLLLDRVSKRWRTAPPPGFVCAAGITASAPAIAKLLQTVAGMAQGMVVLPGLATG
ISKEEWDSLGPFEPDPVTGRRRRRLETHPQYHLKLLLERMGVHRDEFEPWRAASEHDAPP
ARSKAIASAMAPPELTHGWTALPAAERRLAGVRALEVATPAEEAQAIALALRGALEVPGK
TAALVTPDRVLARRVAAHCVRWGLTIDDTAGQPLSILPPGTLLLALIDAAAQGFAPLPLL
TLLKHPLVMPEQRLEWLEGARRLDRALRGPRPAPGLAGIDRHLAEQSGRDGHLRRAAARW
WPTAKAILAPLEAVFDAGSQPVPALLAALRETAQALAGDGLWSRADGRAAADLLDSLERE
GAHGPPRTEPEAMGPLLRTLMEENAVRPPQGGHPRVAILGVLEARLQTADLMILGGLNEG
VWPGLPAPDPWLAPRIRSELGLPGLERRIGLSAHDLAGALGAPEVLLTRARRDASAPTIA
SRFWLRLEALSGGLERAGELAQWLRGLDDPGDHQPAKRPEPSPPIAARPKEISVTEVDRL
KADPFAFYARRMLRLMPLDPVDADPSAAWRGTAVHDVLQRWFEADDCAPDKLRARAEAML
TDERTHPMMRALWQPRLMEAIDWIASEIAAKLSEGRAVLAVEQRGVIQFDGVELSGTFDR
VDRLADGSLAIVDYKTGKPPSLAAVREGFSLQLGLLGLIAERGGYDGISGRASGFEYWSL
SRNRAGGFGYVESPCDPRRREYLPADEFVDRAVAQFEGAARTWLTGEAPFTAKLHPDYAP
YAEYDQLMRRDEWYGRE
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgcccccatctctacaccatcccgccgcatcgcgcctttgccgatgcgctg
gcgatcgggctgatccggcggttcggcggggatccgttgcggctggcgcgggggaccgtg
ttgctgcccaataaccgtgccaagcgatcgatccaggatgcattcgtgcgggcgagcgcg
ggcggattgctgttgccgcggctggtggcggtgggcgatccggagctggacgaggcgctg
ttcgatagcgacgaaggcgagccgatcccggctgcggtcgatccgctgcagcggcggatg
atcctggcgcggctgatccaggaatcgggatcgccggtggatgcggcggaggcggtgcgg
cttgccggcgatctggcggcgacgctggaccagttgctgatcgaggaagtcgcaccgacg
aaactgcgcgagctggagctgacgcaggagctttcggcgcattgggagcggtcgctggcg
ctgttcgaagtggtgctggagcgctggccgcgcgagctggcgcggctggggcggatcgat
ctggccgagcggcgcaccttgctgctcgatcgcgtctctaaacgctggcggacggcgccg
ccgccgggcttcgtctgtgcggcgggcattacggcctccgcgccggccatcgccaagctg
ctgcagaccgtcgccgggatggcgcaggggatggtcgtgctgccggggctggcgacgggg
atcagcaaggaagaatgggactcgctgggtccattcgagcccgatccggtgaccggacgg
cggcggcgcaggctggagacgcatccgcaatatcatctgaagctgctgctcgaacggatg
ggcgtgcaccgcgacgagttcgagccatggcgcgcggcgagcgagcatgatgcgccgccg
gcgcggagcaaggcgatcgcctcggcgatggcgccgcccgagctgacgcatggctggacc
gcgctgccggcggcggaacggcggctcgcaggagtgcgcgcgctcgaagtggcgaccccg
gcggaggaggcgcaggcgatcgcgctggcgctgcgcggggcgctggaagttccgggcaag
accgcggcgctggtgacccccgatcgcgtgctggcgcggcgggtggcggcgcattgcgtg
cgctgggggctgacgatcgacgatacggcggggcagccgctctcgatcctgccgccggga
acgctgctgctcgcgctgatcgacgcggcggcgcagggtttcgcgccgttgccgctgctg
acgctgctcaaacatccgctggtgatgcccgagcagcggctggaatggctggagggtgcg
aggcggctggatcgcgcgctgcgcgggccgcggccggcgccggggctggcggggatcgac
cggcatctggcggagcagagtgggcgcgacgggcatttgcggcgcgcggcggcgcgatgg
tggccaacggcgaaggcgatattggcgccgctggaggcggtgttcgatgcgggatcgcag
ccggtgcccgctttgctggcggcgctgcgcgagacggcgcaggcgcttgccggagacggg
ctgtggagccgggcggacgggcgcgcggcggcggacttgctcgattcgctcgagcgcgag
ggcgcgcacgggccgccgcgcaccgagcccgaggcgatggggccgttgctgcggaccttg
atggaggaaaatgcggtgcggccgccgcagggcgggcatccgcgggtggcgatcctgggc
gtgctcgaggcgcggctgcagaccgccgacctgatgatcctggggggattgaacgagggc
gtgtggccggggctgcccgcgcccgatccctggctcgcgccgcggatccgatccgagctg
gggttgccggggctggagcggcggatcgggctttcggcgcatgatctggccggcgcgctg
ggtgcgcccgaagtgctgctgacgcgggctcggcgcgatgcgagcgctccgacgatcgcc
tcgcgcttctggctgcggctcgaggcgctgtcgggcgggctcgagcgggcgggcgagctg
gcgcagtggctgcgcgggctcgacgatccgggggatcaccagccggccaagcgccccgag
ccctcgcccccgattgcggcgcggcccaaggagatttcggtgaccgaagtcgatcggctc
aaggccgatcccttcgctttctatgcgcggcggatgctgcggctgatgccgctcgacccg
gtcgacgccgatccgagcgcggcgtggcgcgggaccgcggtgcatgatgtgctgcagcgc
tggttcgaggcggacgattgcgcgcccgacaaattgcgcgcgcgggcggaggcgatgctg
acggacgagcggacgcatccgatgatgcgggccttgtggcagccgcggctgatggaggcg
atcgactggatcgcgagcgagattgcggcgaagctgagcgaggggcgcgcggtgctcgcg
gtggagcagcgcggggtgatccagttcgacggggtggagctgagcgggaccttcgaccgg
gtggaccggctggccgacggcagcctggcgatcgtcgactataagaccggcaagccgccg
tcgcttgccgcggtgcgcgaggggttcagtctgcagctggggctgctcgggctgattgcc
gagcgggggggatatgacgggatttcggggcgcgcgagtggattcgaatattggtccttg
tcgcgcaatcgggcggggggcttcggctatgtggagagtccgtgcgatccgcggcggcgg
gagtatctgccggcggacgagttcgtcgatcgtgcggtggcgcagttcgagggggcggcg
cggacctggctgacgggggaggcgccgttcaccgccaagctgcacccggattacgcgcct
tatgcggagtatgaccagctgatgcggcgggatgaatggtatgggcgtgagtag
DBGET
integrated database retrieval system
