Sphingomonas sp. M1-B02: OKW87_05020
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Entry
OKW87_05020 CDS
T11063
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spmb03016
]
OKW87_05020 (truA)
Enzymes [BR:
spmb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
OKW87_05020 (truA)
Transfer RNA biogenesis [BR:
spmb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OKW87_05020 (truA)
Prokaryotic type
OKW87_05020 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UZK67196
LinkDB
All DBs
Position
complement(1041244..1041984)
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AA seq
246 aa
AA seq
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MTRFALTVEYDGRPFMGWQRQDHGPSVQQALEDAAFAVTGERTAVHAAGRTDAGVHALGM
RAHLDIARAITPFRLMEALNARVRPHPVAVLDCVAVPDDWHSRFSCLGRHYEYRIVQRRA
PLTWEAGLAWRIAAELDEAAMQAGAQQLVGRHDFTTFRSAHCQADSPLRTLDRLDVTREG
DRIVVRASARSFLHHQVRSMVGCLALVGQGKWTSADMRSALEARDRAALGFNAPSDGLFF
VAADYP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgactcgcttcgcactaaccgtcgaatatgacggccgccccttcatgggctggcagcgg
caggatcatgggcccagcgtccagcaggcgctggaggacgccgctttcgcggtgaccggc
gagcggaccgcggtgcatgccgcggggcgcaccgacgcgggggtccatgcgctcggcatg
cgcgcgcatctcgacatcgcgcgcgcgatcacgccgttccggctgatggaggcgttgaac
gcgcgggtgcggccgcatccggtggcggtcctcgattgcgtcgcggtgcccgacgattgg
cattcgcgcttctcgtgcctcggccgccattacgaatatcgcatcgtccagcgccgtgcg
ccgctcacctgggaggcggggctggcgtggcggatcgccgccgagctcgacgaagccgcg
atgcaggcgggcgcgcagcagctggtcgggcggcacgatttcaccaccttccgctccgcc
cattgccaggcggacagcccgttgcgaacgctcgatcggctcgatgtgacgcgggaaggc
gaccggatcgtggtgcgggcctcggcgcggtccttcctgcatcaccaggtgcgctcgatg
gtggggtgcctggcgctggtggggcaggggaagtggacctccgccgacatgcgctcggcg
ctggaggcacgcgatcgtgccgccctgggtttcaatgcgccgtcggacgggctgttcttc
gtggcggcggactatccctga
DBGET
integrated database retrieval system
