Sphingomonas sp. M1-B02: OKW87_05045
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Entry
OKW87_05045 CDS
T11063
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spmb03009
]
OKW87_05045
Enzymes [BR:
spmb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
OKW87_05045
Ribosome biogenesis [BR:
spmb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OKW87_05045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
UZK67201
LinkDB
All DBs
Position
complement(1046124..1047320)
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AA seq
398 aa
AA seq
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MPVTDDEVIRVAARGDGVTADGRHVPFTAPGDRVPMEGMVLPGPHHQRPPCRHFPECGGC
QLQHLDDESWSGFIVDRVRDALAAHHLETEIRAPILSPPRTRRRATLHAERRGRQVRLGF
TEQNSHTLIDLDECWVLAPELFALVAPLRGLLAALLPGTRRVNVHLALADQGRDVLIDGM
EAEGLAAAEAITAFASRHKLARFAMDEGFGPTSRWEPEPVTITLAGVPVGFPPGNFLQAT
PEGEAALIAAVQQIGGAARTVADLFAGLGTFTFAFADAKVYAAEAARDPILSLKAAGTRA
QRPIFADHRDLFRRPVTATELANFDLAVLDPPRAGAREQVIEIAAAKTPLVAYVSCNPNT
FARDAETLCKGGYRLDWVQPVGQFRWSTHVELAAKFSK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaccgatgatgaagtgatccgcgtcgccgcgcgcggcgatggcgtgaccgcc
gacggccgccacgtgcccttcaccgcgcccggcgaccgcgtgccgatggagggcatggtc
ctccccggcccgcaccaccagcgccccccctgccgccacttccccgaatgcggcggctgc
cagctccagcatctcgacgacgaatcgtggagcggcttcatcgtcgatcgcgtccgcgat
gcgctcgccgcgcatcatctcgagaccgagatccgcgcgccgatcctctcgcccccgcgc
acccgccgccgcgccaccctccacgccgagcgccgcggccgccaggtccggctgggcttc
accgagcagaacagccacacgctgatcgatctcgacgaatgctgggtgctcgcgcccgaa
ctcttcgcgctcgtcgcacccttgcgcgggctgctcgccgcgctcctccccggcacccgc
cgcgtcaacgtccacctcgctttggccgatcagggccgcgacgtgctgatcgacggcatg
gaagccgagggcctcgccgccgccgaggcgatcaccgccttcgccagccgccacaagctg
gcccgcttcgcgatggacgagggcttcggccccacgtcgcgctgggagcccgagccggtc
accattaccctcgccggcgtccccgtcggcttcccccccggcaacttcctccaggcgacg
cccgagggcgaggccgcgttgatcgccgcggtccagcaaatcggcggcgccgcgcgcacc
gtcgcggacctgttcgccggcctcggcaccttcaccttcgccttcgccgacgccaaggtc
tacgcggcggaggccgcccgcgatccgatcctgtcgctgaaggcggccggcacccgcgcc
cagcgcccgattttcgccgatcaccgcgacctattccgccgcccggtcaccgccaccgaa
ctcgccaatttcgacctcgctgtcctcgatccgccccgcgcgggagcccgcgaacaggtg
atcgaaatcgccgccgctaagaccccgctcgtcgcctatgtctcctgcaatcccaacacc
ttcgcccgtgatgccgagaccctgtgcaaaggcggctaccgcctcgactgggtccagccg
gtaggccagttccgctggtcgacccatgtcgagctggcggcgaagttcagcaaatag
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