KEGG   Sphingomonas sp. M1-B02: OKW87_05080
Entry
OKW87_05080       CDS       T11063                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
spmb  Sphingomonas sp. M1-B02
Pathway
spmb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spmb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OKW87_05080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spmb03400]
    OKW87_05080
Enzymes [BR:spmb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     OKW87_05080
DNA repair and recombination proteins [BR:spmb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     OKW87_05080
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: UZK67208
LinkDB
Position
1054840..1055565
AA seq 241 aa
MGAEPVQEWRKSLASTLDWWSDAGVDMLVDDDARDWLAVPVARAATATVAADVAAPVAEV
LPATLEAFLAWRLGEGAPEADWMTPRIAPQGPADAEWVVFVDMPEADDSEGLLGGSAGKM
FDRMLGAIGLRRDSVYLASLAVAHPLGGQIPGDQEARLVQLARHHLSLLKPRRLLLLGNA
TARILAPPSGSDPSHGKESVNQFAGEMASVASYHPRFLIGKPAFKSEAWKHLLQLNRGLV
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgggggcagaaccggttcaggaatggcggaagagcctggcgagcacgctcgactggtgg
agcgacgccggggtcgacatgctcgtcgacgacgacgcgcgcgactggctggcggtgccg
gtggcgcgggccgccaccgcaacggtcgcggcggacgtagcggcgccggttgcggaggtc
ttgccggctacgctcgaggcattccttgcctggcgactgggcgaaggtgcgccggaggcc
gactggatgaccccgcggatcgcaccgcaggggccggcggacgccgagtgggtggtgttc
gtcgacatgcccgaagctgacgattcggaggggctgctgggcggttcggcaggaaagatg
ttcgatcggatgcttggcgcgatcggtttgcggcgcgattcggtctatcttgcctcgctg
gcggtcgcgcatccgctgggggggcagataccgggcgaccaggaagcgcggctggtgcag
ctggcgcggcaccatctctcgctgctcaagccgcgcagattgctgctgctggggaatgcc
acggcgcgcatcctggcgccgccttccggttcggaccctagccacggtaaagagagcgtt
aaccaatttgcgggagagatggcatcggttgcgagctatcacccgcgttttctgataggg
aagcccgcattcaagagcgaagcctggaagcacctgctgcagttgaaccggggattggtc
gagtga

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