Sphingomonas sp. M1-B02: OKW87_05260
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Entry
OKW87_05260 CDS
T11063
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00030
Pentose phosphate pathway
spmb01100
Metabolic pathways
spmb01120
Microbial metabolism in diverse environments
spmb01200
Carbon metabolism
Module
spmb_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
OKW87_05260 (edd)
Enzymes [BR:
spmb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
OKW87_05260 (edd)
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
UZK67242
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Position
1093180..1095000
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AA seq
606 aa
AA seq
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MTLHPEIAAVTDRIIERSKPRRAAYLDLIRRERESGADRPKLGCANLAHAYAGTDEQRDR
MKDGRAMNIGIVTSYNDMLSAHATYYRYPEQMKVWAIEAGATAQVAGGVPAMCDGVTQGY
SGMELSLFSRDTIALSTGIALSHRVFEGAALLGICDKIVPGLLMGALRFGHLPMVMIPGG
PMRSGLANKDKAAVREAYAEGEVGRPELLEAEIAAYHSKGTCTFYGTANSNQMMMEAMGL
HMPSAAFANPGTKLRQELTRAAVQRLTEIGWNGNDYRPIGHVVDEKAIVNAAIVLLATGG
STNHLIHVPAFARAAGIVIDWEDFDRLSRAVPLLTRVYPNGSADVNGFEDAGGPAFVIRE
LLKGGLMHGDTLTIAKDGMPAYARQSAIEEDRLIWRDLPEKSGDETIVRTLDAPFSPEGG
FRILTGNVGRACIKVSAVDPDRWIIEAPARVFSTQQAVQDAFQAGELDRDVVVVVRFQGP
KANGMPELHKLTPPLGVLQNKGYRVALVTDGRMSGASGKVPAAIHVSPEALGGGPIGLVR
DGDMIRVDAEAGTIEALVDPAEWAAREHAEAPAAAEGTGRELFAMMRLGADEAELGASAM
LAAAGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccaccccgaaatcgccgccgtcaccgatcgcatcatcgagcgttcgaagccg
cgccgcgccgcctatctcgacctgatccgccgtgagcgcgaatcgggcgcggaccggccc
aagctgggctgcgccaacctggcgcatgcttatgccggaacggacgaacagcgcgaccgg
atgaaggacgggcgggcgatgaacatcggcatcgtcacctcgtacaacgacatgctctcg
gcgcacgcgacctattaccgctaccccgagcagatgaaggtctgggcgatcgaggccggc
gccaccgcgcaggtggcgggcggcgtgccggcgatgtgcgacggcgtgacccagggctat
tcgggaatggagctgtcgctgttcagccgcgatacgatcgcgctctccaccgggatcgcg
ctcagccaccgcgtgttcgaaggcgccgctttgctcggcatctgcgacaagatcgtgccc
gggctgctgatgggggcgctgcgcttcgggcatctgccgatggtgatgattcccggtgga
ccgatgcgctcaggcctcgcgaacaaggacaaggccgcggtccgcgaggcctatgcggag
ggcgaggtcggacgccccgagttgctcgaagccgaaatcgccgcctatcactcgaagggc
acctgcaccttttacggcaccgccaattcgaaccagatgatgatggaggcgatggggctc
cacatgccgagcgcggccttcgccaaccccggcaccaagctgcgccaggaactgacccgc
gccgcggtccagcgcctcaccgagatcggttggaacggcaatgactatcgcccgatcggc
catgtcgtcgacgagaaggcgatcgtcaacgcggcgatcgtgctgctcgccaccggcggc
tcgaccaaccatctgatccacgtccccgccttcgcccgcgcggcggggatcgtgatcgac
tgggaggattttgaccgcctctcgcgcgcggtgccgctgctgacgcgagtgtacccaaat
ggctcggcggacgtgaacggcttcgaggatgccggcggccccgccttcgtgatccgcgaa
ctgctcaagggcgggctgatgcacggcgacacgctgacgatcgcgaaggacggcatgccg
gcctatgcgcgccagtcggcgatcgaggaggatcggctgatctggcgcgacttgcccgag
aagagcggtgacgagacgatcgtccgcacgctcgatgcacctttctcccccgaaggcggc
ttccggatcctgaccggcaatgtcggccgcgcctgcatcaaggtgagcgcggtcgatccc
gatcgctggatcatcgaggcccctgcccgcgtcttctccacccagcaggcggtgcaggac
gccttccaggcgggagaactcgatcgcgacgtggtggtcgtggtgcgcttccaggggccc
aaggccaatggcatgcccgagctgcacaagctcaccccgcccctcggggtgctccagaac
aagggctatcgtgtcgcgctggtgaccgacgggcggatgtcgggcgcgtcgggcaaggtg
ccggcggcgatccacgtgtcccccgaggcgctgggcggcggaccgatcgggctggtgcgc
gacggcgacatgatccgtgtcgatgccgaggccggcacgatcgaggcgctggtcgatccg
gcggaatgggcagcgcgcgaacatgccgaggcgccagcggcggcggagggcacggggcgc
gagctgttcgcgatgatgcggcttggggccgatgaggccgagcttggcgcgtcggcgatg
ctggccgccgctgggctgtga
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