Sphingomonas sp. M1-B02: OKW87_06010
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Entry
OKW87_06010 CDS
T11063
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00470
D-Amino acid metabolism
spmb00550
Peptidoglycan biosynthesis
spmb01100
Metabolic pathways
spmb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OKW87_06010
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OKW87_06010
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OKW87_06010
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spmb01011
]
OKW87_06010
Enzymes [BR:
spmb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
OKW87_06010
Peptidoglycan biosynthesis and degradation proteins [BR:
spmb01011
]
Precursor biosynthesis
Amino acid ligase
OKW87_06010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UZK67384
LinkDB
All DBs
Position
complement(1260246..1261169)
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AA seq
307 aa
AA seq
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MSASPLHIAVLMGGWSAEREVSLMSGAGIADALESLGHRVTRIDMGRDVGVKLAEAKPDL
VFNALHGTPGEDGTVQGMLDLMGLKYTHSGLVTSVIAIDKQLTKQALVPHGIPMPGGRMV
RSADLYERDPLPRPYVLKPVNEGSSVGVAIVTDEGNYGNPIGRDVRGPWQEFDELLAEPF
IRGRELTTAVLGDRALGVTELKPKSGFYDYDAKYTDGLTEHVFPANVPDDIADACKRIAL
DAHRLLGCKGASRSDFRWDDGQGVDGLFLLEVNTQPGMTPLSLVPEQARHLGIGYAELVQ
RIVEDAL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttcacccctccacatcgccgtgctgatgggcggctggtcggccgagcgtgag
gtttcgctgatgtcgggcgcggggatcgccgatgcgctcgagagcctggggcatcgcgtc
acccgcatcgacatgggccgcgacgtgggcgtgaagctggccgaggcgaagccggacctg
gttttcaacgcgctccacggcacccccggcgaggacgggacggtgcagggcatgctcgac
ctgatgggattgaaatacacgcattcggggctggtcacgtcggtgatcgcgatcgacaag
caactgaccaagcaggcgctggtgccgcacggcatccctatgcccggcgggcggatggtg
cgcagcgcggacctctacgagcgcgatccgctgccgcggccttatgtgctcaagccggtc
aacgagggctcgtcggtcggcgtggcgatcgtcaccgacgagggcaattacggcaatccg
atcgggcgcgacgtgcgcgggccgtggcaggaattcgacgaactgctcgccgagccgttc
attcgcgggcgcgagctgacgaccgcggtgctgggcgatcgggcgctcggcgtgaccgag
cttaagcccaagagcggcttctatgactatgacgccaaatataccgacgggctgaccgag
catgtcttcccggccaacgtgcccgacgacattgccgatgcctgcaagcggatcgcgctc
gacgcgcaccggctgctcggctgcaagggcgcgtcgcgttcggacttccgctgggacgat
ggccagggggtcgacgggctgttcctgctcgaggtcaacacccagccggggatgacgcca
ctcagtcttgtaccggagcaggcgcggcacctgggaataggctatgccgagctggtgcaa
cgcatcgtggaagacgctctgtga
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