Sphingomonas sp. M1-B02: OKW87_07300
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Entry
OKW87_07300 CDS
T11063
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spmb03009
]
OKW87_07300
Enzymes [BR:
spmb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
OKW87_07300
Ribosome biogenesis [BR:
spmb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OKW87_07300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UZK67625
LinkDB
All DBs
Position
1501410..1502513
Genome browser
AA seq
367 aa
AA seq
DB search
MNKDVRQFVVAADDDGIRLDRWFKRHLADINFNLVSRWARTGQIRVDGARATPGDRLTVG
QTIRVPPDEPVKATVAAKPKSTRPPLSDEQTEYMREMVIHQDAQAIVINKPPGLATQGGT
GTMEHVDGMLDALQFECENRPKLVHRLDKDTSGALLLARTSRAAAYFSKHFSGRTAKKVY
WALVVGVPEIEDGIIDLPLAKQPGTGGEKMHVDQKEGQAARTRYRVIDHAASRTAWVELQ
PFTGRTHQLRVHMAAIGHPIVGDGKYGLQEAFLTGGISRKMHLHARRLRIDHPDGGKIDI
LADLPTHFAESMDTLGFELAEGDRIAMDDGPPPMSREMLKSKARAHAKGVRKERRGERRG
RGEAKKK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggacgtccgccagttcgtggtcgccgccgatgatgacggcatccggctcgat
cgctggttcaagcggcatcttgccgacatcaacttcaacctcgtctcgcgctgggcgcgc
accgggcagatccgcgtcgacggcgcgcgcgcgacgccgggcgaccggctgacggtcggc
cagacgatccgcgtgccaccggacgagccggtcaaggcgacggtcgcggccaagcccaaa
tccacgcgtccgccgctcagcgacgagcagaccgaatatatgcgcgaaatggtcatccac
caggatgcccaggcgatcgtgatcaacaagccccccggcctcgccacgcagggcggcacc
ggcacgatggagcatgtcgacggcatgctcgatgcgctccagttcgagtgcgagaaccgc
cccaagctggtccaccgcctcgacaaggataccagcggcgcgctgctgctggcacgaacc
tcgcgtgcggcggcctatttctcgaagcatttctccggccgcaccgcgaagaaggtctat
tgggcactcgtcgtcggcgtgcccgagatcgaagacggcatcatcgacctgccgctcgcc
aagcagcccggcaccggcggcgagaagatgcatgtcgaccagaaagaaggccaggccgcc
cgtacgcgataccgggtgatcgatcatgccgcgagccgcaccgcctgggtcgagctccag
cccttcaccggccgaacccaccagctccgcgtccatatggccgctatcggccacccgatc
gtcggcgacggcaaatatggcttgcaggaggccttcctgaccggcggcatctcgcgaaag
atgcacctccacgcgcgccggctgcggatcgatcatcccgacggcggcaagatcgacata
ctggccgatctgccgacccatttcgccgaatcgatggacacgctcggcttcgagctggcc
gagggcgatcgcatcgccatggacgacggtcccccgccgatgagccgcgaaatgctcaaa
tccaaggcgcgcgcgcacgccaagggcgtccggaaagaacgccgcggcgaacggcgcggc
cggggcgaagcgaagaagaaatga
DBGET
integrated database retrieval system
