Sphingomonas sp. M1-B02: OKW87_08980
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Entry
OKW87_08980 CDS
T11063
Symbol
rhmD
Name
(GenBank) L-rhamnonate dehydratase
KO
K12661
L-rhamnonate dehydratase [EC:
4.2.1.90
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00051
Fructose and mannose metabolism
spmb01100
Metabolic pathways
spmb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
OKW87_08980 (rhmD)
Enzymes [BR:
spmb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.90 L-rhamnonate dehydratase
OKW87_08980 (rhmD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
UZK64675
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Position
complement(1876543..1877739)
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AA seq
398 aa
AA seq
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MASAGLSRIKHVRAFTVRGGGADYHDQGGDHWIDDHIATPMSKYPDYRQSRQSFGINVLG
TLVVEIEAEDGTIGFAVTTGGEPACFIVEKHLARFLEGRDPREVEKIWDQMYFSTQYYGR
KGLVVNAISGVDLALWDLLGKLRGEPVYQMLGGAVRDELQFYATGARPDVAKELGFIGGK
MALHHGPAEGLEGMHKNIATLADMRSKVGDDFWLMLDCWMALDVEYATRLAHRAYNECGL
KWIEEAISPDDYWGYAELKRNAPKGLLVTTGEHEATRWGFRMLLEMDCCDIIQPDVGWCG
GVTELLKISALADAHGKMVVPHGSSVYSYHFVITRHNSPFAEFLMMHPGPTEVVPMFHPQ
LIGEPVPEGGRLKVSALDKPGFGVELNRDLPMHRPYTH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcagcgggactttcgcggatcaagcatgtgcgggccttcaccgtacggggcggc
ggggccgattatcacgatcagggcggcgaccactggatcgacgatcatatcgcgacgccg
atgtccaaatatcccgactatcgccagtcgcgccagagcttcggcatcaacgtgctcggc
accttggtggtcgagatcgaggccgaggacggcacgatcggcttcgcggtgaccaccggc
ggcgagccggcctgcttcatcgtcgaaaagcatctcgcccgcttcctcgagggccgcgat
ccgcgcgaagtcgagaagatctgggaccagatgtatttctcgacccaatattatggccgc
aagggcctggtcgtgaacgccatttcaggcgtcgatctcgctttgtgggacctgctcggc
aagctgcgcggcgagccggtctatcagatgctcggcggcgcggtgcgcgacgagctgcaa
ttctacgcgaccggcgcgcgtcccgacgtggccaaggaactcggcttcatcggcggcaag
atggcgctccaccacggccccgccgagggcctggaggggatgcacaagaatatcgccacg
ctcgccgacatgcgcagcaaggtcggcgacgatttctggctgatgctcgattgctggatg
gcgctcgacgtcgaatatgccacccgcctggcgcaccgcgcgtacaacgaatgcggcctc
aaatggatcgaggaggcgatcagccccgacgattattggggctatgccgaattgaagcgc
aacgcgccgaaggggctattggtcacgaccggcgagcatgaggcgactcgctggggcttc
cgcatgctgctcgagatggactgctgcgacatcatccagcccgatgtgggctggtgcggc
ggcgtgaccgaattgctcaagatcagtgcgctcgccgatgcgcatggcaagatggtcgtg
ccgcacggctcgtcggtttacagctatcacttcgttatcacccgccataattcgcccttc
gccgaattcctgatgatgcatccggggccgaccgaagtggtgccgatgttccacccgcaa
ttgatcggcgagcccgtgcccgaagggggccggctcaaggtcagcgcgctcgacaagccc
ggcttcggcgtcgagctcaaccgcgatctgccgatgcaccgtccctacacccattga
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