Sphingomonas sp. M1-B02: OKW87_09045
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Entry
OKW87_09045 CDS
T11063
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00040
Pentose and glucuronate interconversions
spmb01100
Metabolic pathways
spmb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OKW87_09045
Enzymes [BR:
spmb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
OKW87_09045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Beta-prop_THOC3
Motif
Other DBs
NCBI-ProteinID:
UZK64688
LinkDB
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Position
complement(1896174..1897490)
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AA seq
438 aa
AA seq
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MRLGRLFCNALGLFALAASGAAMAQPAAEWIDPLTGHKVVRISREADTASLYFHQNSYTP
QGDKMVVSVPDGIAVVDLKTWSIKPLVKDKQIALLFTGRKTRTAYYSTRDRTDVGGPGPS
TVFGVDIDSGKVRKIADIPAGSIGSINADETLLLGQWAESDRPLQPGSTAQDRRQFGQVN
YQALGPDGKPLSFADAKEVRLNDRLEARIPMEIFTIDIRTGARKVVTASTDWLNHVQFSP
TDPQQIMYCHEGPWHKVDRIWTIRADGMGKRSIHPRTMNMEIAGHEFFAPDGKTIWYDLQ
TPRGQVFWLASYDLTSGKRRWYNVERNQWSVHFYQSPDGKRFSGDGGDSEMVARAPDGKY
LYLFTPKDIPDVAGIHAPGAENLISPGTLVSEKLVDMRKHDYRLEPNMTFTPDGKWIVFR
GNFEGAAHVYAVEVAKAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgggacgcctgttttgcaatgcgctggggctgttcgcgctcgccgcatccggg
gccgcgatggcgcagcccgccgccgaatggatcgatccgctgaccgggcacaaggtcgtc
cggatcagccgcgaggcggacacggccagcctctattttcaccagaacagctatacgccg
cagggcgacaagatggtcgtctccgtgcccgacgggatcgcggtggtcgatctcaagacc
tggtcgatcaagcctttggtcaaggacaagcagattgccttgctgttcacgggccgcaag
acgcgcacggcctattattcgacgcgtgatcgcaccgatgtcggcgggccggggccgtcg
accgtgttcggcgtggatatcgacagcggcaaggtccgcaagatcgccgacattccggcg
ggctcgatcgggtcgatcaatgccgacgagacgctgctgctcggccaatgggccgagagc
gatcgtccgctccagccgggctcgaccgcgcaggatcgccgccagttcggacaggtcaat
tatcaggcgctggggccggacgggaagccgctgagctttgccgatgccaaggaagtccgg
ctcaacgaccggctcgaggcccgcatcccgatggagatcttcacgatcgacatccgcacc
ggcgcgcgcaaggtggtgacggcctcgaccgactggctcaaccatgtccaattctcgccg
accgacccgcagcagatcatgtattgccatgagggcccgtggcacaaggtcgatcgcatc
tggacgattcgcgccgacgggatgggcaaacgctcgatccatccgcgcacgatgaacatg
gagattgccgggcacgagttcttcgcgcccgacggcaagacgatctggtacgatctgcag
accccgcgcgggcaggtcttctggctcgccagctatgacctgacgagcggcaagcgccgc
tggtacaatgtcgagcgcaaccaatggtcggtgcatttctaccagtcgcccgacggcaag
cgtttctcgggcgacggcggcgacagcgagatggtcgcgcgcgcgcccgacgggaaatat
ctgtatctgttcacgccgaaggacattcccgacgtggcggggattcatgcgccgggggcg
gagaatctgatctcgccggggacgttggtgtcagagaaattggtcgacatgcgcaagcat
gactatcggctcgagcccaacatgaccttcacgccggacggtaaatggatcgtgttccgc
ggcaatttcgagggcgcggcgcatgtctatgcggtggaggtcgcgaaggcgcgatga
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