Sphingomonas sp. M1-B02: OKW87_09060
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Entry
OKW87_09060 CDS
T11063
Name
(GenBank) DUF4982 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00052
Galactose metabolism
spmb00511
Other glycan degradation
spmb00600
Sphingolipid metabolism
spmb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
OKW87_09060
09103 Lipid metabolism
00600 Sphingolipid metabolism
OKW87_09060
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
OKW87_09060
Enzymes [BR:
spmb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
OKW87_09060
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N2
Glyco_hydro_2_N
Motif
Other DBs
NCBI-ProteinID:
UZK64691
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All DBs
Position
1900195..1903086
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AA seq
963 aa
AA seq
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MDRRSFLATSALASAFPPFTASAAQAEPYSGSDLPMPAPRDGLDPRPLPEEPGRLRLDHG
WRFHLGDIAMPEIIGHQPSYENAKAGASHGAAAMTFDDSDWREVELPHDWAIEAPVDPKA
NIAQGYRRRGVGWYRRTIRLDPALKGKYLEMDVGAIATHATIWVNGTIVDRNFSGYNGIH
VDLTPLARFGDELNTIAIRVDADPMEGWWYEGAGIYRHIWLAVREAVHIATDGVHCDPRR
AADGSWSVPVSVDLGNIGETARSVTVEAQLLGPAGETVAALGTSAEIRPLVPATARVTLP
VSDPKLWSPDVPTLYTIRVRVSGDGKLMDERRIPIGFRHFRFDSRTGFHLNGQPLKLKGT
CNHQDHAGVGTAIPDTLWDWRVRRLKALGSNAIRMSHNAPPTELLDACDRHGLLVMNENR
VFNPSPDYMEQLEWLVRRDRNRPSVFMWSVFNEEPMQGSPQGYEMVRRMAAAVKALDDSR
PVTAAMNDGMFTPLNVSQAVDVVGFNYQIAQYDKYHAAFPDKPLTSSEDTSAFSTRGEYK
TDKARNIMTSYDDEGAPWGSTHTVGWKAIAERPFLAGAFVWTGFDYHGEPTPFEWPSTSS
FFGIMDLCGFPKLAFHQHRAQWVDSEPVLALQPHWNWPGQEGQPIRVVALANVERVALLL
NGKPVGEQAVDRLTMPEFKVPYAPGRLEAVGYRGGREVVRARIETVGPPVALRLTPDRRV
MAGDSEDAQPVTVDAVDAKGRHVPTANLPASFAIEGGEIIGLGNGDPNDHDPEKGNARKL
FNGLAQVIVRAAPGRGKLRLRATAPGLKPASLIVDRIAAAPRGFVEPTRPEMLLSSWQRA
PFTEARPDPNAQMASDDRYATMRGRSGRLEGPSGTGRWNAYRVQFRPQARVRTRGGVLVF
TQLVGRAEIWLDGVKVAEKRDPAPAALEVTLPTGQAERTLAVLVEAEPGKPSGFGKLVVV
RER
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcgatcctttctggcaaccagcgcgctggcgagcgccttcccgcccttcacc
gccagcgcggcgcaggcggaaccctatagcggctcggacctgccgatgcccgccccgcgc
gacggcctcgatccccgcccgctgcccgaggagccgggccggctgcggctcgatcatggc
tggcgcttccatctcggcgacatcgcgatgcccgagatcatcggccaccagccaagctac
gaaaatgcgaaggccggcgcctcgcacggcgccgccgcgatgaccttcgacgacagcgac
tggcgcgaagtcgaactgccgcacgactgggcgatcgaggcccccgtcgatcccaaggcc
aacatcgcccagggctaccggcgccgcggcgtcggctggtatcgccggacgatccggctc
gatccggcgctcaagggcaaatatctcgagatggatgtcggcgcgatcgcgacgcatgcg
acgatctgggtcaacggcacgatcgtcgatcgcaacttcagcggctataacggcatccat
gtcgacctgacccccctcgcccgcttcggcgatgagctcaacacgatcgcaatccgggtg
gatgccgatccgatggagggctggtggtacgaaggcgccggcatctatcgccacatctgg
ctggcggtgcgcgaggccgtccacatcgccaccgatggcgtccattgcgacccgcgccgc
gccgccgacggcagctggagcgtgccggtctcggtcgatctgggcaatatcggcgagacc
gcacgaagcgtgacggtcgaggcgcagttgctcggccccgccggggagaccgtggcggcg
ctcggcaccagcgccgagattcgcccgctcgtcccggccaccgcccgcgtcacgctgccg
gtcagcgatccgaagctctggtcgcccgacgtgccgacgctctacacgatccgggtgcgg
gtcagcggcgacggcaagctcatggacgaacgccgcatcccgatcggcttccgccacttc
cgattcgacagccgaaccggcttccacctcaacggccagccgctcaagctgaagggcacc
tgcaaccatcaggaccatgccggcgtcggcaccgcaattcccgatacgctgtgggactgg
cgcgtgcggcgcttgaaggcgctcggctccaacgcgatccgcatgtcgcacaatgccccg
cccaccgaattgctcgatgcctgcgaccgccacgggctgctggtgatgaacgagaaccgc
gtgttcaatcccagccccgactatatggagcagctcgaatggctggtccgccgcgatcgc
aatcgcccgtccgtcttcatgtggtcggtgttcaacgaagagccgatgcagggctcgccc
cagggctatgagatggtccgccgcatggccgcggcggtgaaggcgctcgacgacagccgc
ccggtcaccgcggcgatgaacgacggcatgttcacgcccctgaacgtcagccaggcggtc
gacgtcgtcggcttcaactatcagatcgcgcaatatgacaaatatcacgcggcattcccc
gacaagccgctgaccagctcggaggataccagcgccttctccacccgcggtgaatataag
accgacaaggcgcgcaacatcatgaccagctatgacgacgaaggcgcgccctggggctcg
acccacaccgtcggctggaaggccatagcggaacgccccttcctggccggcgcgttcgtc
tggaccggcttcgactatcatggcgagccgaccccgttcgaatggccctccacctcgagc
ttcttcgggatcatggacctttgcggcttccccaagctcgccttccaccagcatcgcgcg
caatgggtcgatagcgagccggtgctcgcgctccagccgcactggaattggcccggccag
gaaggccagccgatccgggtggtggcgctcgccaatgtcgagcgcgtcgcgctgctgctc
aacggcaagcccgtcggcgagcaggcggtcgatcggctcacaatgcccgaattcaaggtg
ccctatgcccccggcaggctggaggccgtgggctatcggggcgggcgcgaagtggtgcgc
gcgaggatcgagacggtcggcccgccggtcgcgctgcggctcacccccgatcgccgggtt
atggcgggcgatagcgaggatgcgcagccggtcaccgtggacgcggtcgacgccaaaggc
cgtcatgtgccgaccgcaaacctgcccgccagcttcgcgatagagggcggcgagatcatc
ggcctgggcaacggcgatcccaacgatcacgatcccgaaaagggcaatgcgcgaaagctg
ttcaacgggctggcgcaggtgatcgtccgcgccgcgcccggccgcggcaagctgcggctg
cgggcgactgcgccggggctcaagccggcgtcgctgatcgtcgatcggatcgccgccgcg
ccccgcggcttcgtcgagccgacgcggcccgagatgctgctgagttcgtggcagcgcgcc
ccgttcaccgaggccaggcccgatcccaacgcccagatggccagcgacgatcgctatgcg
acgatgcgcggccgttccggtcggctcgagggtccgagcggcacgggccggtggaacgcc
tatcgcgtgcagttcaggccgcaggcccgtgtccgcacgcgcggcggcgtgctggtcttc
acccaactggtcggcagggccgagatatggctggacggggtgaaggtcgccgaaaagcgc
gatccggcgcccgcggcgctcgaagtgacgctgcccaccgggcaggccgagcggacgctg
gccgtgctggtggaagccgaaccgggcaagccctcgggcttcggcaagctggtggtcgtt
cgagaacgatga
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