Sphingomonas sp. M1-B02: OKW87_10680
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Entry
OKW87_10680 CDS
T11063
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OKW87_10680 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spmb03019
]
OKW87_10680 (rnc)
03009 Ribosome biogenesis [BR:
spmb03009
]
OKW87_10680 (rnc)
03036 Chromosome and associated proteins [BR:
spmb03036
]
OKW87_10680 (rnc)
Enzymes [BR:
spmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OKW87_10680 (rnc)
Messenger RNA biogenesis [BR:
spmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OKW87_10680 (rnc)
Ribosome biogenesis [BR:
spmb03009
]
Eukaryotic type
90S particles
RNase
OKW87_10680 (rnc)
Prokaryotic type
rRNA processing factors
OKW87_10680 (rnc)
Chromosome and associated proteins [BR:
spmb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OKW87_10680 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UZK67963
LinkDB
All DBs
Position
2215372..2216055
Genome browser
AA seq
227 aa
AA seq
DB search
MGEWIAKTFGRTPANLSAYERALTHGSQAAANYERLEFLGDRVLGLVIAEWLFQHFPGEP
EGALSRRLNALVTGPVCADVARRLGVVPHLRLGKQAREDGAADSDNVLGDVMEALIGAYY
LEYGLEAARTFVRSAWEPLIDVHSQAPKHPKSELQEWAAAHNRRPPEYAILDRSGPNHAP
RFKVKVSIGKLAEASAEGTSKQEAETAAAAALLAKLAKLAKLAKLAK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ctgggagagtggatcgccaagaccttcggccggacgcctgccaatctctccgcttatgag
cgcgcgctgacgcatggcagccaggccgcagccaattacgagcggctcgaatttctcggc
gaccgcgtgcttggcctcgtcatcgccgaatggctgttccagcatttccccggcgagccc
gaaggcgcgctttcgcgccgcctgaacgcactggtgaccggtccggtctgcgcggacgtc
gcccgccggctgggcgtggtcccgcacctgcgcctgggcaagcaagcgcgcgaggacggc
gccgctgacagcgacaatgttctcggcgacgtgatggaggcgttgatcggcgcttattat
ctcgaatatggcctggaggccgcgcgcactttcgtccgctcggcgtgggagcctctgatc
gacgtccacagccaggcgcccaagcatcccaagtccgagctgcaggaatgggccgccgcc
cacaaccgccgcccccccgaatatgcgatcctcgaccgctccggccccaaccacgcgccg
cgcttcaaggtgaaggtcagcatcggcaagctcgcggaggccagcgcagagggcacgagc
aagcaggaagcggaaaccgcggccgcggcagcgctgctggcgaagctggcgaagctggcg
aagctggcgaagctggcgaaatag
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