Sphingomonas sp. M1-B02: OKW87_11595
Help
Entry
OKW87_11595 CDS
T11063
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spmb03016
]
OKW87_11595 (truB)
Enzymes [BR:
spmb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OKW87_11595 (truB)
Transfer RNA biogenesis [BR:
spmb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OKW87_11595 (truB)
Prokaryotic type
OKW87_11595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UZK65157
LinkDB
All DBs
Position
complement(2412629..2413624)
Genome browser
AA seq
331 aa
AA seq
DB search
MHGWIILDKPLGLGSTQGVSAVKRALRDGGYGKFKVGHGGTLDPLATGVLPIAIGEATKL
AGRMLDSDKVYDFTIAFGVQTDTLDLEGVEIAASDVRPTRAAIEAVLPRFTGPIAQVPPA
YSALKVDGERAYDLARAGQEVVLASRDVTIHALTLSSPERGGGPSEAWWRGRAASEALEE
SPLHQPSAGPPPRAGEELDEITLSAHVSKGTYIRSLARDIALALGTVGHVTMLRRTRAGP
FTLDPAISLDKLADAAKARQLETLLLPLRAGLVDIPALSLTPDQAGLLRQGQVLAGIAAE
EGQYFALLGEVPVALVEAQAGFVRVVRGFNL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggatcatcctcgacaagccgctcgggctcggctccacccaaggggtgagc
gcggtcaagcgcgcgctgcgcgacggcggctatggcaagtttaaggtcggccatggcggc
acgctcgatccgctggcgaccggcgtgctgccgatcgcgatcggcgaggcgaccaagctc
gcggggcggatgctcgacagcgacaaggtctatgacttcacgatcgcgttcggggtccag
accgacacgctcgaccttgagggtgtggagatcgccgcgtccgatgtgcgccccacgcgt
gccgctatcgaagcggtgttgccccgcttcacaggcccgatcgcgcaggtgcctccggct
tactccgcgctgaaggtcgatggcgagcgggcctacgacctcgcccgcgccggccaggaa
gtggtgctcgcgagccgcgatgtcacgatacatgccctcactttatcctccccggaacgg
ggagggggaccaagcgaagcttggtggagggggcgcgccgcaagcgaggcgcttgaggag
agccccctccaccagccttcggctggtccccctccccgtgccggggaggagctagacgaa
atcaccctcagcgcccatgtctccaagggcacctatatccgctccctcgcccgcgacatc
gccctcgcgctcggcaccgtcggccatgtcaccatgctccgccgcacccgcgccggcccg
ttcaccctcgatcccgcgatttcgctggacaaattggccgacgccgctaaggcccggcag
cttgaaacactcctcctgccgttgagggcggggctggtcgacatcccggctctctccctc
acccccgaccaggcagggctgctccgacaggggcaggtcttggccgggattgccgctgaa
gagggccaatatttcgcgctgctgggggaagtccctgtcgcgctggtagaggctcaggcc
ggattcgtccgggtcgtccgcggcttcaatctgtaa
DBGET
integrated database retrieval system
