Sphingomonas sp. M1-B02: OKW87_11620
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Entry
OKW87_11620 CDS
T11063
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spmb03021
]
OKW87_11620 (nusA)
03009 Ribosome biogenesis [BR:
spmb03009
]
OKW87_11620 (nusA)
Transcription machinery [BR:
spmb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OKW87_11620 (nusA)
Ribosome biogenesis [BR:
spmb03009
]
Prokaryotic type
rRNA transcription factors
OKW87_11620 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_2
S1
HHH_5
KH_1
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
UZK65162
LinkDB
All DBs
Position
complement(2418265..2419893)
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AA seq
542 aa
AA seq
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MATATAISANRAELIAIADSVAKEKLIDRAIVIEAMEDAIQRAAKNRYGSENDIRAKLDP
VSGDLRLWRVVEVVEAVDDYFKQVSVKDAQKLQKGAVVGDYIVDPLPPIEFGRIQAQASK
QIIFQKVRDAERERQFEEFKDRMGEIITGVVKRVEFGHVVVDLGRAEGVIRRDQQIPREV
VRVNDRIRSIILNVRRENRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGS
RAKIGVISHDSGIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSPDTATFVVNALQPAN
VSRVVIDEEDDRIEVVVPDDQLSLAIGRRGQNVRLASQLTGKAIDILTEADASEKRQKEF
VQNSELFQNELDVDETLAQLLVAEGFGSLEEVAYVELSEIAEIEGFDEDLGAELQNRAQE
ALERREEANRVARRELGVEDALATMPYLTEAMLVTLGKAGIKTLDDLADLATDELVEKKR
QEPRRRNEDAPKRPEPKGGVLAEYGLSDEQGNEIIMAARAHWFEDEAAPAATSEDAVAES
EQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccactgccactgccatttccgccaaccgggccgagctgatcgcgatcgccgattcg
gttgccaaggaaaagctgatcgaccgcgccatcgtcatcgaggcgatggaagacgcgatc
cagcgcgccgccaagaatcgctacgggagcgagaatgacatccgcgccaagctcgatccg
gtctcgggcgatcttcgtctgtggcgcgtcgtcgaagtggtcgaggcggtcgacgattat
ttcaagcaggtctcggtcaaggatgcgcagaagctccagaagggcgcggtcgtcggcgat
tatatcgtcgatccgctgcccccgatcgaattcggccgcatccaggcgcaggcctcgaag
cagatcatcttccagaaggtccgcgacgccgagcgcgagcgccagttcgaggaattcaag
gatcgcatgggtgagatcatcaccggcgtggtcaagcgggtcgagttcggccacgtcgtc
gtcgatctgggccgcgccgagggcgtgatccgccgcgatcagcagatcccgcgcgaagtc
gtccgcgtcaacgatcgcatccgctcgatcatcctcaacgtccgccgcgaaaatcgcggg
ccgcagatcttcctcagccgcgcgcatccggatttcatgaagaagctgttcgcgcaggaa
gtccccgaaatctacgacggcatcatcgagatcaaggccgccgcccgcgatccgggttcg
cgcgccaagatcggcgtgatcagccatgattcgggcatcgatccggtcggcgcctgcgtc
ggcatgaagggcagccgcgtccaggcggtcgtccaggaaatgcagggcgagaagatcgac
atcatcccctggtcgcccgacaccgcgaccttcgtggtcaacgcgctccagccggcaaat
gtcagccgcgtcgtgatcgacgaggaggatgaccgcatcgaagtcgtcgtcccagacgat
cagctcagcctcgcgatcggccgccgcggccagaatgtccgcctggcgtcgcagctcacc
ggcaaggcgatcgacatcctcaccgaggccgacgcctcggagaagcgccagaaggaattc
gtccagaatagcgagctgttccagaacgagctcgacgtcgacgagacgctggcccagctg
ctggtcgccgaaggcttcggcagcctcgaagaggtcgcctatgtcgagctgtccgaaatc
gccgagatcgaaggcttcgacgaggatctgggcgccgagctgcagaaccgcgcgcaggaa
gcgctcgagcgccgcgaggaagccaatcgcgtggctcgccgcgagctcggcgtcgaggat
gcgctcgcgacgatgccctatctgaccgaggcgatgctggtcacgctcggcaaggcgggc
atcaagacgctcgacgatctcgccgatctcgcgaccgacgaactggtcgagaagaagcgc
caggagccacgccgccgcaacgaggacgcccccaagcgtcccgagcccaagggcggcgtg
ctcgccgaatatgggctgagcgacgagcagggcaacgagatcatcatggctgcccgcgcg
cactggttcgaggacgaagcggccccggccgcaacttcggaggacgctgttgcggaatcc
gaacaatga
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