Sphingomonas sp. M1-B02: OKW87_11925
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Entry
OKW87_11925 CDS
T11063
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb03030
DNA replication
spmb03430
Mismatch repair
spmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OKW87_11925
03430 Mismatch repair
OKW87_11925
03440 Homologous recombination
OKW87_11925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spmb03032
]
OKW87_11925
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_11925
Enzymes [BR:
spmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OKW87_11925
DNA replication proteins [BR:
spmb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OKW87_11925
DNA repair and recombination proteins [BR:
spmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OKW87_11925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
UZK65219
LinkDB
All DBs
Position
2476514..2477536
Genome browser
AA seq
340 aa
AA seq
DB search
MKASAAQARAAVDKPNPETRLYLFHGPDEAGAAELAARLARALGPEVERIDIDMKMLREQ
PGRLADEAASMSLFGRARYIRLAPVEEAAGEAIALLLAAERAGNPVVAIGPGLKASGKLV
KLAIAAPKALSHACYVPEGIDAARIATTVAREHGLRLTGDVPQRLAAATGGDRAILAREV
EKLALFLDAALDRPRDADGAALDAIGADLGEPELFHAIDAVLDGRVAEIGGELARLSEAG
GSAIPLLRQLTRRLMTLSELRADLDKGAGVDEVLEKHRIFFREKAATGRALRRWNASQIA
RAIDRVRQAERAMMHSGSAGEVLAEAECAAIARAAARARG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgagcgcggcgcaggcccgcgccgcggtcgacaagccgaaccccgagacgcgg
ctctatctgtttcacggccccgatgaagccggcgcggccgaacttgccgcccggctggca
cgcgcgctgggccctgaggtcgagcgtatcgatatcgacatgaagatgctgcgcgagcag
cctgggcggctcgccgacgaagcggcgtcgatgtcgctgttcggccgcgcacgttacatt
cgcttggccccggtcgaggaagcggcgggcgaggcgattgcgctgctgctggcggcggaa
cgcgcgggcaatccggtggtcgccatcggcccggggctcaaggccagcggcaagctcgtc
aagctggcgatagcggctcccaaggcgctttcgcatgcctgctacgtccccgagggcatc
gatgcggcgcgtatcgcgacgaccgttgcgcgcgagcacggcttgcggctcaccggcgac
gtgccccagcgcctggcggccgcgacgggcggcgatcgcgctatcctggcgcgcgaagtc
gagaagttggccctgtttctcgacgccgcgctggatcgcccgcgcgatgccgacggcgcg
gcgctcgacgcgatcggcgccgatctgggcgagcccgagctcttccacgccatcgatgcg
gtactcgacggtcgggttgcggagattggcggggaactcgcccgattgagcgaagccggc
ggctccgcgatcccgctgctgcggcagctcacccggcggctgatgacgctgagcgagctt
cgtgctgatctagacaagggcgcgggtgtcgacgaagtacttgaaaagcatcgtattttc
ttccgcgaaaaggccgcgaccggacgcgccctgcgccgctggaacgccagccagatcgcc
cgcgcgatcgaccgcgtccgccaggccgagcgtgcgatgatgcattcggggagcgccggc
gaagtccttgccgaagccgaatgcgccgccattgcccgcgccgccgcgcgggcgcggggc
tag
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