Sphingomonas sp. M1-B02: OKW87_12840
Help
Entry
OKW87_12840 CDS
T11063
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OKW87_12840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_12840
DNA repair and recombination proteins [BR:
spmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OKW87_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UZK65390
LinkDB
All DBs
Position
complement(2658083..2658967)
Genome browser
AA seq
294 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYTATKSGAQISFHQIHEPSGQRIKYEKTAPGVGAVDVD
EIVKGFEVEKGEYVLLEQDEIDAVKLESKKTLELTQFVDANEIDVLYYEKPYFVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDSAPDPELLDLAETLIGKKVAKFDPAGFHDRYVDALRDLIERKKKAKGKKIIEDKEG
DAPNRGSNVVDLMAALKKSLEKPDARTSAAVKTKPAKAAAKEAPAKKAPARKRA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcgcctattggcagggacagatacggctggctttggtctcgattcccgtg
gaaatctataccgcgaccaaatcgggcgcgcagatcagcttccaccagatccacgagccg
agcggccagcggatcaaatatgagaagaccgcccccggcgtcggtgcggtcgacgtcgat
gagatcgtcaagggcttcgaggtcgagaaaggcgaatatgtcctgctcgagcaggacgag
atcgatgcggtgaagctcgagtcgaagaaaacgctcgagctcacccagttcgtcgacgcg
aacgagatcgacgtgctctattatgaaaaaccctatttcgtggtcccggccgacgatctc
gccgaagaggcgttcatcgtcctgcgtgaggcgctgcgccgcaccaagaaggtcggcctc
ggccagctcgcgatgcgcggccgcgaatatgtcgtgagcctcaagccctgcggccgcggc
atggtgctcgagacgctccgctatgccgacgaggtcaacaaggcgcagggctatttccgc
gacataccggacagcgcgcccgacccggagctgctcgacctggccgagacgctgatcggc
aagaaggttgcgaagttcgaccccgcgggcttccacgatcgctatgtcgacgcgctcagg
gacctcatcgagcgcaagaagaaggccaagggcaagaagatcatcgaggacaaggagggc
gacgccccgaaccgcggctcgaacgtcgtcgacctgatggctgcgctgaagaaatcgctc
gagaaacccgacgcaaggactagcgccgccgtgaagaccaagcccgccaaggcggcggcc
aaggaagccccggccaagaaggcgccggcaaggaaacgggcctaa
DBGET
integrated database retrieval system