KEGG   Sphingomonas sp. M1-B02: OKW87_12840
Entry
OKW87_12840       CDS       T11063                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
spmb  Sphingomonas sp. M1-B02
Pathway
spmb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:spmb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    OKW87_12840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spmb03400]
    OKW87_12840
DNA repair and recombination proteins [BR:spmb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     OKW87_12840
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: UZK65390
LinkDB
Position
complement(2658083..2658967)
AA seq 294 aa
MAARAYWQGQIRLALVSIPVEIYTATKSGAQISFHQIHEPSGQRIKYEKTAPGVGAVDVD
EIVKGFEVEKGEYVLLEQDEIDAVKLESKKTLELTQFVDANEIDVLYYEKPYFVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDSAPDPELLDLAETLIGKKVAKFDPAGFHDRYVDALRDLIERKKKAKGKKIIEDKEG
DAPNRGSNVVDLMAALKKSLEKPDARTSAAVKTKPAKAAAKEAPAKKAPARKRA
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcgcgcgcctattggcagggacagatacggctggctttggtctcgattcccgtg
gaaatctataccgcgaccaaatcgggcgcgcagatcagcttccaccagatccacgagccg
agcggccagcggatcaaatatgagaagaccgcccccggcgtcggtgcggtcgacgtcgat
gagatcgtcaagggcttcgaggtcgagaaaggcgaatatgtcctgctcgagcaggacgag
atcgatgcggtgaagctcgagtcgaagaaaacgctcgagctcacccagttcgtcgacgcg
aacgagatcgacgtgctctattatgaaaaaccctatttcgtggtcccggccgacgatctc
gccgaagaggcgttcatcgtcctgcgtgaggcgctgcgccgcaccaagaaggtcggcctc
ggccagctcgcgatgcgcggccgcgaatatgtcgtgagcctcaagccctgcggccgcggc
atggtgctcgagacgctccgctatgccgacgaggtcaacaaggcgcagggctatttccgc
gacataccggacagcgcgcccgacccggagctgctcgacctggccgagacgctgatcggc
aagaaggttgcgaagttcgaccccgcgggcttccacgatcgctatgtcgacgcgctcagg
gacctcatcgagcgcaagaagaaggccaagggcaagaagatcatcgaggacaaggagggc
gacgccccgaaccgcggctcgaacgtcgtcgacctgatggctgcgctgaagaaatcgctc
gagaaacccgacgcaaggactagcgccgccgtgaagaccaagcccgccaaggcggcggcc
aaggaagccccggccaagaaggcgccggcaaggaaacgggcctaa

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