Sphingomonas sp. M1-B02: OKW87_13820
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Entry
OKW87_13820 CDS
T11063
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OKW87_13820 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_13820 (ung)
Enzymes [BR:
spmb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OKW87_13820 (ung)
DNA repair and recombination proteins [BR:
spmb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OKW87_13820 (ung)
Prokaryotic type
OKW87_13820 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UZK65578
LinkDB
All DBs
Position
complement(2873869..2874576)
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AA seq
235 aa
AA seq
DB search
MEESKLHRSWHAPLRQEFEAPYMAALRGFLASEQAAGKRIFPAEANWLRALELTPLDRVR
VVILGQDPYHGEGQAHGLCFSVQPGTRTPPSLVNIYKELERDLGIPRAPHGFLEAWARQG
VLLLNSVLTVESGKPASHQGRGWERFTDAVIAQVNARPEPMVFLLWGSHAQKKAANVDST
QQGGRHLLLKAPHPSPLSAYTGFHGCGHFSQANAFLDAHGRGTIDWALPLGVDIC
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcaagctgcaccggagctggcacgcgccgctgcgccaggaattcgaagcg
ccgtacatggctgcgctccgcggcttcctcgcctccgagcaagcggcgggaaagcgcatc
ttcccggccgaggcgaactggctccgcgcgctggagctcaccccgctcgatcgggtccgc
gtcgtgatcctgggccaggacccctatcatggcgaggggcaggcgcatggcctgtgcttc
tcggtccagccgggcacgcgcacgccgccgagcctggtcaacatctacaaggaactggag
cgcgatcttggcattccccgggcgccgcatggtttcctcgaagcatgggcgcggcagggg
gtgctgttgctcaactcggtgctgaccgtcgagagcggcaagccggcgtcgcaccagggc
cgcggctgggagcgcttcaccgatgcggtgatcgcgcaggtcaatgcccgccccgagccg
atggtattcctgctctgggggagccatgcccagaaaaaggcggcgaacgtggattcgact
cagcaaggcgggcggcatctgctactcaaagccccccatccctcgcccctttccgcttac
accggcttccacggctgcggccatttctcccaggccaacgccttcctcgacgcccatggt
cgcggcacgatcgactgggcgctacccttgggggtcgacatctgctaa
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