Sphingomonas sp. M1-B02: OKW87_13890
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Entry
OKW87_13890 CDS
T11063
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00550
Peptidoglycan biosynthesis
spmb01100
Metabolic pathways
spmb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OKW87_13890
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OKW87_13890
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spmb01003
]
OKW87_13890
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spmb01011
]
OKW87_13890
Enzymes [BR:
spmb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
OKW87_13890
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OKW87_13890
Glycosyltransferases [BR:
spmb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
OKW87_13890
Peptidoglycan biosynthesis and degradation proteins [BR:
spmb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
OKW87_13890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UZK65591
LinkDB
All DBs
Position
complement(2886160..2888682)
Genome browser
AA seq
840 aa
AA seq
DB search
MADGSISSFKMRITREIGGVRGFFARVRHRWWFRSLALLALLGGIGLLLIWIFIARNLPS
VDTLRSYEPPLPTNVRSYDGTPIHSYARERRVQLSYPEYPKQLVHAFLSAEDKTFFSHHG
VDIPGVISALINNLTSSGRPVGASTITQQVAKNLLVGNEASYVRKAKEGILAWRIENTLS
KEQILELYLNSIELGRNAGGVAAASEAYFGKDLDALTLPQMAYLAILPKGPANYDPDRHA
ERAIERRNWVLGQMADNGFISPAERDAARAAPLGTVPRQTPKFERVGGYFVEEVRRQLMD
KFGETNAAGPYSVYGGGLWVRTSLDPRLQQYAQKALRDGLLRLERGRGWSGPLNEKPLDL
ARGWLQPFLNTNIGVDYENWRAAVAIAREGDSWQLGFDDGTTGRLPRWAATMPVRGKGGE
AFNAIEAGDILVVAPESAGTFALRSVPRISGGMVVEDPRTGQVLAMQGGFDSRIQSFNRA
TQAQRQPGSTIKPLVYAAAMEQGLSPSTIVVDGPFCVWQGANLGQKCFRNFGNMRGAGPK
TLRWGVEQSRNLMTVQVANQIGMDKVVDLIQRVGISKQKSPPYLSYALGAGETTVMRMVN
AYAILVNHGRALTPSLIDFVQDRRGEVIWPENWRACEKCNAPDWDRGPMPRPVTRARQVI
EPMSAYQIVHITEGVIQRGTATVLRDLGRPIMGKTGTTSGPTDVWFVGGVPQMIAGLYLG
YDTPTNLGGYVQGGTVAAPIFKDFAKPAFEGMEKLPFTAPAGIRMARVDRGSGRRVFGGW
PTSDPLASVIWEAFKPESEPRRGRRDQQEEAEKKAVVRKTAPKAANQGERDFLQREGGIY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcagcatttccagcttcaagatgcggatcacgcgcgagatcggcggggtc
cgcggattcttcgcgcgcgtgcgacaccgctggtggttccgctcgctggcgctgctggcg
ctgctcggcgggatcgggctgttgctcatctggatcttcatcgcgcgcaatctgccctcg
gtggacacgctgcgcagctatgagccgccattgcccaccaatgtccgctcgtacgacggc
accccgatccacagctatgcgcgcgagcgccgcgtccagctgagctatccggaatatccc
aagcagctggtccacgccttcctctccgccgaggacaagaccttcttcagccatcacggc
gtagacattcccggcgtcatctcggcgttgatcaacaatttgaccagcagcggccgcccg
gtcggcgcgtcgacgatcacgcagcaggtcgccaagaatctgctcgtcggcaacgaagcc
agctatgtccgcaaggccaaggagggcatcctcgcctggcggatcgagaatacgctgtcg
aaggagcagatcctcgaactctatctcaattcgatcgaactcgggcgcaacgccggcggc
gtggcggcggcgagcgaagcctatttcggcaaggatctggacgcactcacgctgccgcaa
atggcctatctcgcgatcctgcccaagggcccggccaattacgatcccgatcgccacgcc
gaacgcgcgatcgagcggcgcaactgggtgctcgggcagatggccgacaatggcttcatc
agccccgccgagcgcgacgcggcgcgcgccgcgccgctgggcaccgtgccgcgtcagact
cccaagttcgagcgcgtcggcggctatttcgtcgaggaagtccgtcgccagctgatggac
aagttcggcgagaccaacgcggcgggaccttacagcgtctatggcggcgggctgtgggtg
cgcacctcactcgatccgcggcttcagcaatatgcccagaaggcgttgcgcgacggcctg
ttgcggctcgagcgcggccgcggctggagcggcccgctgaacgagaagccgctcgacctc
gcgcgcggctggctccagcccttcctcaacaccaatatcggcgtcgattacgagaattgg
cgcgccgccgtggcgatcgcccgcgaaggcgattcgtggcagcttggctttgatgacggc
accaccggccggcttccccgctgggcggcgacgatgccggtccgcggcaagggcggcgag
gcgttcaacgcgatcgaagcgggcgacatattggtcgtcgcccccgaaagcgccggcacc
ttcgcgctgcgcagcgtgccgcgcatctcgggcgggatggtggtcgaggatccccgcacc
ggccaggtgctggcgatgcagggcgggttcgactcgcgcatccagtcgttcaatcgcgcc
acccaggcgcagcgccagcccggctcgacgatcaagcctctggtctatgccgccgcgatg
gaacaggggctcagcccctccacgatcgtcgtcgatggccccttctgcgtctggcagggc
gccaatctcggccagaaatgcttccgcaatttcggaaacatgcgcggcgcgggccccaag
acattgcgctggggcgtcgagcaatcgcgcaacctgatgacggtccaggtcgccaaccag
atcggcatggacaaggtcgtcgacctgatccagcgcgtcggcatctcgaagcagaagtcc
ccgccctatctcagctacgcgctgggcgcgggcgagacgacggtgatgcggatggtcaac
gcttatgcgatcctggtcaatcacggtcgcgcgctgaccccctcgctgatcgatttcgtc
caggatcgccgcggcgaggtgatctggcccgagaactggcgcgcctgtgagaagtgcaac
gcccccgattgggatcgcggcccgatgccccgcccggtcacccgcgctcgccaggtgatc
gagccgatgagcgcctatcagatcgtccatatcaccgaaggcgtgatccagcgcggcacc
gccaccgtgctgcgcgatctcggccgcccgatcatgggcaagaccggcaccacgtcgggc
cctaccgatgtctggttcgtaggcggcgtgccgcagatgatcgccggcctctacctcggc
tatgacacgccgaccaacctcggcggctatgtccagggtggcaccgttgcggcaccgatc
ttcaaggatttcgccaagcccgccttcgaaggcatggagaaattgcccttcactgcgccc
gcgggaatccgcatggcgcgggtcgatcgggggagtggccgacgcgtgttcggcggctgg
ccgaccagcgatccgctcgcctcggtgatctgggaagccttcaagcccgaaagcgaaccg
cgccgcggccgccgcgaccagcaggaagaggccgagaaaaaggccgtcgtccgcaagacc
gcgcccaaggccgcgaaccagggcgagcgcgatttcttgcaacgcgagggcggaatctac
tag
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