Sphingomonas sp. M1-B02: OKW87_14830
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Entry
OKW87_14830 CDS
T11063
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OKW87_14830 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_14830 (ruvB)
Enzymes [BR:
spmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OKW87_14830 (ruvB)
DNA repair and recombination proteins [BR:
spmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OKW87_14830 (ruvB)
RecFOR pathway proteins
OKW87_14830 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
Sigma54_activat
AAA_2
nSTAND3
AAA_22
Bac_DnaA
AAA_18
AAA_17
AAA_14
TsaE
Rad17
AAA_25
NB-ARC
AAA_28
RNA_helicase
NTPase_1
AAA_33
AAA_24
ABC_tran
NACHT
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UZK65768
LinkDB
All DBs
Position
3084018..3085040
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AA seq
340 aa
AA seq
DB search
MTDADRILAPARTPEDIDAALRPKHLDEFVGQKAARENLRVFIQAAKSRGEALDHVLFFG
PPGLGKTTLAQIVAREMGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLAPAV
EEVLYPAMEDRALDLMIGEGPSARSVRIDLPRFTLVGATTRQGLLTQPLRDRFGIPIRLQ
FYTVEELERVVTRAAALLDLHIAPDGAHEIARRSRGTPRIAGRLLRRVRDFANVLGEATV
HAKAADAALTRLEVDALGLDTMDRRYLMMIADIYKGGPVGVETLAAGLSEPRDTIEEVIE
PYLIQIGMIARTARGRCLNAAGWKHLGLNPPPTAQEGLFD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgatcgcatcctcgccccggcacgcacgcccgaggacatcgacgcagcg
ctgcgccccaagcatctcgacgaattcgtcggccagaaggccgcgcgcgagaatctgcgc
gtgttcatccaggccgccaagtcgcgcggcgaggcgctcgaccatgtcctgttcttcggg
ccccccggcctcggcaagaccacgctcgcccagatcgtcgcgcgcgaaatgggggtgggc
tttcgcgccacgtcgggcccggtgatcgccaagtcgggcgatctcgcggcgctgctcacc
aatctcgaggatggcgacgtcctcttcatcgacgagatccaccgcctcgcccccgcggtc
gaggaagtcctctacccggcgatggaagaccgcgcgctcgatctgatgatcggcgaaggc
ccctccgcccgctcggtgcggatcgacttgccgcgcttcaccctcgtcggcgccaccacc
cgacagggcctgctcacccagccgctgcgcgatcgattcggcatcccgatccggctgcaa
ttctacacggtcgaagagctggagcgcgtcgtcacccgcgccgcggcattgctcgatctg
cacatcgcccccgacggcgcgcatgagatcgccaggcgctcgcgcggcacgccccgcatc
gccggccggctgctgcgccgggtacgcgatttcgccaatgtgctgggcgaggcgacggtc
catgccaaggcggcggatgccgcgctcactcgcctcgaagtcgacgcgctcgggctcgat
acgatggatcgccgctatctgatgatgatcgccgatatctacaaaggcggcccggtcggg
gtcgagacgctcgccgcggggctttcggagccgcgcgacacgatcgaggaagtgatcgaa
ccctatctgatccagatcggcatgatcgcccggacggcgcgcgggcgctgcctcaacgcc
gccggctggaagcatctcggcctcaaccctccgcccaccgcgcaggaagggctgttcgac
tga
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