Sphingomonas sp. M1-B02: OKW87_17005
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Entry
OKW87_17005 CDS
T11063
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spmb03032
]
OKW87_17005
03036 Chromosome and associated proteins [BR:
spmb03036
]
OKW87_17005
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_17005
DNA replication proteins [BR:
spmb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OKW87_17005
Chromosome and associated proteins [BR:
spmb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
OKW87_17005
DNA repair and recombination proteins [BR:
spmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
OKW87_17005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UZK66181
LinkDB
All DBs
Position
complement(3506653..3506931)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQMLVDDNPGLAVREVEKIVSVFFDEIVGRLTEDGRVELRGFGAFSTRARDGRT
GRNPRTGETVEVEPKRVPYFKPGKEMRIRLNV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttcggaactcgtgcagatgctggtcgatgacaatcccggtttggcggtccgc
gaagtggagaagatcgtctcggtcttcttcgacgagatcgtgggtcgcctgaccgaagac
ggccgcgtcgagcttcgcggcttcggtgcattttccacccgcgcgcgcgacggccgcacc
ggtcgcaacccgcgcaccggagagaccgtcgaggtcgagcccaagcgcgtcccctatttc
aagcccggcaaggaaatgcgcatccggctcaacgtctga
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integrated database retrieval system
