Sphingobium sp. MI1205: K663_00145
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Entry
K663_00145 CDS
T04383
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K663_00145 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spmi03021
]
K663_00145 (rho)
03019 Messenger RNA biogenesis [BR:
spmi03019
]
K663_00145 (rho)
Transcription machinery [BR:
spmi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K663_00145 (rho)
Messenger RNA biogenesis [BR:
spmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K663_00145 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
S1CSD-TOTE-2
Spore_III_AA
NACHT
Fungal_virus_P2_C
AAA
AAA_25
AAA_14
GpA_ATPase
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMK16423
LinkDB
All DBs
Position
1:25293..26549
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKDLKKKSPADLVTMAEELGVEGASTLRKQDLLFAILKAEAENGEQIMGEGTIEVLTD
GFGFLRSPEANFLAGPDDIYVSPNQVRKFGLRTGDTVEGEIRAPKDGERYFALTKLMSVN
FDDPDVVRHRVNFDNLTPLYPTQKLVLDSLDPTVKDKSARVIDIVSPQGKGQRALIVAPP
RTGKTVLLQNIAKAITDNHPEVFLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVDKAKLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFDSMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaaggatctcaagaagaaatcacccgccgacctcgtcaccatggcggaagag
ctgggcgtcgaaggcgcatcgaccctgcgcaagcaggacctgctgttcgcgatcctcaag
gccgaggccgagaatggcgagcagatcatgggcgagggcacgatcgaggtgctgacggac
ggcttcggcttcctgcgcagtcctgaggcgaatttcctggccggtcccgatgacatctat
gtttcgcccaaccaggtccgcaagttcggcctgcgcaccggtgataccgtcgaaggcgaa
atccgcgcacccaaggacggcgaacgctatttcgcgctgaccaagctgatgtcggtcaat
ttcgacgatcccgatgttgtgcgccaccgcgtcaatttcgataacctgacgccgctctat
ccgacccagaagctggtgctcgactcgctcgacccgaccgtcaaggacaagtcagcgcgc
gtcatcgacatcgtgtcgccgcagggcaagggccagcgcgcgctgatcgtcgcgccgccg
cgtacgggtaaaacggtgctgttgcagaatatcgccaaggcgatcaccgacaaccatccc
gaagttttcctgatcgtgctgttgatcgacgagcgcccggaagaagtgaccgacatgcag
cgcagcgtgaagggggaggtcgtgtcatcgaccttcgacgaacctgcgtcgcggcacgtc
caggtcgccgaaatggtgatcgaaaaggccaagcgcctggtggaacacaagaaggatgtg
gtgatcctgctcgattcgatcacccgcctgggccgcgcctacaacacggtcgtccccagt
tccggcaaggtgctgaccggcggtgtggacgcaaacgccctgcagcgtcccaagcgtttc
ttcggcgccgcgcgtaatatcgaggagggcggctcgctgtccatcatcgccacggcgctg
atcgacaccgggagccgcatggacgaagtcatcttcgaagagttcaagggcaccggcaat
tcggaaatcgtcctggaccgcaaggtggcggacaagcgcatcttcccggcgctggacgtc
ggcaagtcgggcacccgcaaggaagagctgctggtcgacaaggccaagctcagcaagatg
tgggtgttgcgccgtatcctgatgcagatgggcacggtcgatgccatggaattcctgctc
gacaagatgaaggattccaagacgaacgaagacttcttcgattcgatgaaccagtaa
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