Sphingobium sp. MI1205: K663_01280
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Entry
K663_01280 CDS
T04383
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi00260
Glycine, serine and threonine metabolism
spmi00270
Cysteine and methionine metabolism
spmi00680
Methane metabolism
spmi01100
Metabolic pathways
spmi01110
Biosynthesis of secondary metabolites
spmi01120
Microbial metabolism in diverse environments
spmi01200
Carbon metabolism
spmi01230
Biosynthesis of amino acids
Module
spmi_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
K663_01280
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K663_01280
00270 Cysteine and methionine metabolism
K663_01280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spmi04147
]
K663_01280
Enzymes [BR:
spmi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
K663_01280
1.1.1.399 2-oxoglutarate reductase
K663_01280
Exosome [BR:
spmi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
K663_01280
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
HutP
NAD_binding_2
ACT_AHAS_ss
F420_oxidored
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AMK16648
UniProt:
A0A126R3P0
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All DBs
Position
1:272753..274333
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AA seq
526 aa
AA seq
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MPKVLISDKMDPRAAAIFRDRGVEVDEITGKTPEELKAIIGQYDGLAIRSSTKVTKEILD
AATNLKVIGRAGIGVDNVDIPAASAKGVVVMNTPFGNSITTAEHAIALMFALARQLPEAN
AQTQQGLWPKNGFMGVEVTGKTLGLIGAGNIGSIVASRALGLKMKVVAFDPFLTPERAVE
MGVEKADLDTLLAKADFITLHTPLTDQTRNILSRENLAKTKKGVRIINCARGGLVDEAAL
KEAMDSGHVAGAALDVFVQEPAKESPLFGTPNFICTPHLGASTDEAQVNVALQVAEQLSD
YLLDGGITNALNVPSLSAEEAPKLKPYMALAEELGSLVGQLEGDHVQGVSVEVEGHAAEL
NQKPITAAVLAGLMRVYSDTVNMVNAPFLAKERGLDVREVRHDREGDYQTLVRVTVKTES
GDKSVAGTLFGHGSPRLVELFGIKVEADLEGHMLYIVNQDAPGFIGRLGSTLGEANVNIG
TFHLGRRNQGGEAVLLLSVDGAVSQEVLNDICKLAGVKTVKLLRFA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggtacttatttccgacaagatggacccccgggccgccgcgatcttccgcgac
cgtggcgtcgaggtcgatgaaatcaccggcaagacccccgaagagctgaaggccatcatc
ggccaatatgacggcctcgccatccgcagttcgaccaaggtcaccaaggaaatcctggac
gccgccaccaacctgaaggtcattggccgcgccggcatcggcgtcgacaatgtcgatatt
ccggcagcctcggccaagggcgtggtggtgatgaacaccccgttcggcaactccatcacc
accgccgaacatgccatcgcgctgatgttcgcgctggcccgccagctgcccgaagccaac
gcccagacccagcagggcctgtggcccaagaacggcttcatgggcgtggaagtcaccggc
aagacgctgggcctgatcggcgcgggcaatatcggttcgatcgtcgccagccgcgcgctc
ggcctgaagatgaaggtcgtcgccttcgatcctttcctgaccccggaacgcgccgtcgaa
atgggcgtggaaaaggccgatctcgacacgctgctggcgaaggccgacttcatcacgctg
cacacgccgctgaccgaccagacccgcaacatcctgagccgtgaaaacctcgccaagacc
aagaagggcgtgcgcatcatcaactgcgcgcgtggcggactggtcgatgaggccgcgctc
aaggaagcgatggattcgggccatgtcgctggcgccgcgctcgatgtgttcgtgcaggaa
ccggccaaggaatcgcccctgttcggcacgcccaacttcatctgcactccgcatctgggc
gcatcgaccgacgaagcacaggtgaacgtcgcgcttcaggtcgccgaacagctcagcgac
tatctgctcgatggtggcatcaccaacgcgctgaacgtgccgtccctgtcggcggaggaa
gcgcccaagctcaagccatacatggcgctggccgaagaactgggcagcctggttgggcag
cttgagggcgaccatgtgcagggcgtctcggtcgaggttgagggccatgccgccgaactc
aaccagaagccgatcaccgctgcggtgctcgctggcttgatgcgcgtctattcggacacg
gtgaacatggtcaacgcgcctttcctggcaaaggaacgcggccttgacgtgcgcgaagtg
cgtcacgaccgcgaaggcgactatcagaccctcgtccgcgtcacggtaaagaccgagagc
ggcgacaagtcggttgccggcacgctgttcggccatggcagcccccgtctggtcgagctg
ttcggcatcaaggtcgaagccgatctggaaggccacatgctctacatcgtcaaccaggac
gcgcccggcttcattggccgcctcggctcgacgctgggcgaggcgaacgtcaacatcggc
accttccaccttggccgccgcaaccagggcggtgaagccgtgctgctgctctcggtcgat
ggcgccgtgagccaggaagtgctgaacgacatctgcaagctcgcaggcgtcaagacggta
aagctgctgcgctttgcgtaa
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