Sphingobium sp. MI1205: K663_01995
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Entry
K663_01995 CDS
T04383
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_01995
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K663_01995
Archaeal homologous recombinant proteins
K663_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
ABC_tran
Nuf2_DHR10-like
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_16
SMC_N
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMK16790
UniProt:
A0A126R326
LinkDB
All DBs
Position
1:complement(411546..413828)
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AA seq
760 aa
AA seq
DB search
MRVLAIRGRNLASLNGDFEVDFEAEPLSDAGIFAITGPTGAGKSTLLDAMCLALFDSVPR
LGAAPARAKFETAQGDELSAGDPRAILRHGSGEGYAELDFVGRDGERYRARWTVQRARQK
TDGRMQATRHNLTRLADGEILGGTKTETLAEIHRLVGLSAEQFRRAVLLAQGDFEAFIKA
DDNERAQLLERLTGSHIYASLGRAAHEKATTLRAQQQAILDRIEAQNGLDDETRRIAEEQ
QSAAKDVADRTASALGELSKAVRWETDRIALANKVTECELAASIANAAREEAAPRHEALR
LSKAAYALAGDWTAVQEAATQAQKAQQTVVLRQSALEQASERVTQTATEENQAIANVQVE
TERVAAQSPEIEEARTLDRKLSETSVSLDGIAGVRAARAQALSECKEVEKAAGGSLTEAI
ETRDVHASWLTANAGLATLAAQQQELAAELVEIAAVDIKLSQLSESAKEAEASKIEANAT
WEAAKAAEEGTAAAAIWARNILDEAKASAPSDAAFSALIEKRDRLGGLSPLLVDWKHQEA
QVQTSRDLLVRLRSNLDDAKAERKDLVVRHSQVSSSLPILRAQLQEARRAGELAETASGE
AAMQLRATLEDGQACPVCGATEHALSAIDSLLGLQLREQRERIAELDASLSSKTAEEAAL
TAGIQATDQSILRLDHDIESQTAALAAASNNAQSAFAVLSEKCSSVDLDPAGPDFEATLQ
SELAALDKQRASMTEARTAVTIAQVAYSATIWVRGQRLSG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcctagcaatccgcggacgcaatctcgccagcctgaacggcgattttgaagtt
gatttcgaagccgagccactaagcgacgccggcatctttgcgatcaccggcccgacaggc
gcagggaaatctaccctgcttgacgcaatgtgcctggcattgttcgattcggtaccacgt
ctcggcgcagcaccggcacgggccaagttcgaaactgcccaaggtgacgagttgtcggca
ggagaccctagggccatccttcggcatggctccggtgaggggtatgcggaattggacttc
gtgggccgggacggcgagcgataccgtgctcgatggaccgttcagcgcgcccgtcagaag
accgatggccgcatgcaggccacccggcacaacctcacgcgccttgctgacggcgagatc
ttgggtgggaccaaaactgaaacgctagcggagattcaccgtctcgtcggtttgtcagct
gagcagtttcgtcgggccgtcctcctggcgcagggcgatttcgaagccttcatcaaggct
gacgataacgagcgagcccagctactcgaacggctgaccgggtcacatatttatgcgagt
cttggccgcgcagctcatgaaaaggcaacgacgctccgggcccagcagcaggcaatccta
gaccgcattgaggcgcagaacggcctcgacgacgaaacacgccggatcgccgaagagcag
caaagcgccgcgaaggacgttgcagatcgaaccgcgtctgcgctgggagaactctccaaa
gctgttcgctgggagaccgatcgcattgccttggccaacaaggtgacggaatgtgagttg
gccgcatcgatcgcgaacgcagcccgcgaagaagccgcccctcggcacgaagcattgcgc
ctaagcaaagcggcgtacgcgctcgccggagactggaccgcggtccaggaagcggccacg
caggcgcaaaaagcgcagcaaactgttgtcctgcggcaaagtgcacttgagcaggcaagc
gaacgcgtaacgcaaacggcaaccgaagaaaatcaggcgatagctaacgtccaggtcgaa
acggaacgggttgcggcgcaatctcctgagatcgaagaagcccgcacgctcgaccgcaag
ctttccgaaacaagcgtatcactcgatggcatagcaggcgtccgcgctgcgcgcgcgcaa
gccctatccgaatgtaaagaggttgagaaggctgccggcggttcgttgactgaggccata
gagacccgagacgttcatgcatcgtggcttacggcgaacgccgggcttgccacattggct
gcacagcagcaggaactcgcggcagagctcgtcgagatcgcagccgtcgatataaagctg
tcccagctttcagagagcgcaaaggaagcagaggcttccaaaatagaggccaacgccaca
tgggaagccgccaaggcagccgaagagggaacagccgccgctgccatatgggctcgcaac
atattggacgaggctaaggcttcagcaccatccgatgctgccttctcagcgctcattgaa
aaacgggatcgcctgggaggtctttctcctctcctagtagactggaagcatcaagaagct
caggtacaaacatcccgtgacctcctggttcgtctgcgcagcaatctcgatgacgctaag
gccgaacgcaaagatctggtcgtccggcattcccaggtcagctcctcccttcctattctg
cgagcgcaattgcaggaggcacggcgtgccggcgagctagccgaaacggcctcgggcgaa
gcggcaatgcaacttcgcgccacgcttgaggatggacaggcctgcccagtttgcggagcg
accgaacatgcgttgagtgcgatcgactcgctcttgggcctacagcttcgggagcagcgg
gagcgcatcgccgagctggacgcctcattgtcttcaaagaccgctgaagaggccgccctc
accgcaggcatccaggctactgaccagtcaatcctccggctggaccacgacatagaaagt
cagaccgctgcattggctgcggccagcaataatgcccaatctgcctttgcagtcctgtca
gaaaagtgcagctcggtggaccttgatccggccgggcctgacttcgaagccactctgcaa
agcgaactcgccgcgctggataagcagcgcgcttcgatgacggaggcgaggaccgcagtc
acgattgcgcaggtcgcctatagcgcgacgatctgggtgagaggtcagcgactatcagga
tga
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