Sphingobium sp. MI1205: K663_02110
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Entry
K663_02110 CDS
T04383
Name
(GenBank) uvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_02110
Enzymes [BR:
spmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K663_02110
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K663_02110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMK16813
LinkDB
All DBs
Position
1:complement(433253..436411)
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AA seq
1052 aa
AA seq
DB search
MTVPNITTVVASAGAGKTTRIVGNIAKEVTSRDPETIVATTFTVKAADELIERSRAKLFE
LGMPDKAARLLGARFGTVNAICGQIVSENAIALGRSPRAEVIPEGSVPRIFAIAADAAIE
RHAPTLNSLADVMGFFEPKRAADAERSDWRTTVRRLIELARANGIPAQDLSVSAERSVAT
FLELLPPVSIRRSDDLDADLRKAVSSAVTAVPVESSATAKPHVMLLRQTDASIRRGERIS
WPNWARLSKVGCAKKDGQAFIDALDAVAQAASRHPAHPRLREDCSQFIRSVFACATEALT
AFQAYKAKRGLLDFTDQEALALDVLRDPVMSAGLGERIGRLFVDEFQDSSPLQVAIFTAM
SGLVDASTWVGDPKQAIYGFRNADSALTQAAFAGVAASSSEPQDVLATSYRSREGIINLV
NAAFAPALSAMGLKAEDHAFSGTGRSEEGFTQAPLAVWWLEGKLELQYAALAAQIREMVT
ADQTWEVAAKPNGVRALRAGDIAILCRSKADIAKVSAALSQQGVKAAVEREGLTQTPHVQ
LVMAAFRWVADPTDRLALAELARFFAEDPESETWLEALGAENASEALLAIVPISTALQEI
HEGILSLTPADLIDAIILLPELNRHIESWGDVPARLDDLEALRGFARSYEESCAGEGSPA
TPSGLALALAAENPARPRSLRDDAVKVMTYHGAKGLEWPVVILTGLGKEPKPRLFEPMAE
ADGDVDWQNPLVGRWIRYWPWPYASQEKDVYLDSSAPSSALGQRAAIRSRDEEARLLYVG
MTRARDHLVFAAPAKGTLHWLKVLDGDETEHFALPRSGGEEIHAGTKTFPARTATLVCGE
GGESQPPVVSFGRIARPATHRAPLYRRPSEASSSETFIIVEKSTIGPRLPFAGSPDMTLL
GEAVHAIIAADQPHDSYDARLIQAQAILDRWGVHQVAAKDVLEANERLFAEISKRWPSGR
IHRETPVSARIGDQLVTGRIDLLVEHDSGFAIIDHKSFPGSPDSWDARAVGHGSQIQLYA
DALDKARPGVPCELFIHMPIVGGLLQVGTSSC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcccaatatcacgaccgtcgtggcgtctgccggtgccggcaaaaccacccga
attgtcggcaacatcgcgaaggaggtcacatcccgtgatcccgagacgatcgtcgcaacc
acattcacggtgaaagcggcggacgaactgatcgagcgctcgcgtgctaaactgttcgaa
ttgggcatgccggataaggcagcgcgattgcttggagcccgctttggaacggtgaacgcc
atttgcggtcagattgtatctgagaacgccatcgctttggggcgatctccgcgggccgag
gtcattcccgaaggcagcgtgccacgaattttcgcgatcgctgctgatgctgcgattgag
cgccacgcgccgacgcttaactcgctcgccgatgtcatggggttcttcgagcccaagcga
gccgctgacgctgaacgaagtgattggcggaccaccgtcaggcgtttgatcgagctcgct
cgagcgaatggaattcccgcccaggatctatccgtttcagcggagcgatcagtcgcaacc
ttcctcgaactgctaccaccggtgtcgatccgacgcagtgacgatcttgatgcagatttg
cgaaaggccgtaagttcggcagtgactgcggttcctgttgaatcgagcgcaactgccaag
ccccacgtaatgttgctgcgccagaccgatgcaagcattcgtcgaggagaacggatttcc
tggccaaactgggcccgcctatcgaaggtgggctgcgccaagaaagatggtcaggccttc
atcgacgctctcgacgcagttgcacaagcagcgagccgccaccctgcacatccgcggctt
cgggaggattgcagccagttcatcaggtcggtcttcgcctgtgcgaccgaagccctgacc
gcattccaagcttataaagcaaagcgcggcttattggatttcaccgaccaagaggcgctc
gcgctcgacgtccttcgcgatccggtaatgtccgccggactgggcgagcgcattggtcgg
ctgtttgtcgatgaatttcaagattccagcccgcttcaagtcgccattttcactgcgatg
tccgggttagtcgacgcaagcacgtgggtgggagaccccaagcaggccatctacggcttc
cgcaatgcggacagcgccctcacccaagccgcgtttgcaggggtagctgcatcgtcgagt
gaaccgcaggatgtgctagcgacctcataccgaagccgcgagggcatcataaacctcgtc
aacgccgcctttgcgccagccctgagcgcgatgggtcttaaggcggaggatcatgcgttc
agcggaacgggtcgcagcgaagagggattcacgcaggcgccgctggcagtctggtggctc
gaaggaaagcttgagcttcaatatgccgctttagccgcccaaatccgcgagatggtgaca
gccgaccaaacatgggaagtggcagccaagcccaatggcgttcgggcgctccgcgctgga
gacatagcgattctgtgccgcagcaaagcggacatcgccaaagtgtcggctgcgctcagt
cagcaaggtgtcaaggcagccgttgagcgtgaaggccttacccaaacgccgcatgtccaa
ctggtaatggcggcattccgctgggttgcagatcccacagaccgtctcgcgcttgccgaa
cttgcccgcttcttcgccgaggatccagaatcagaaacctggcttgaggcgcttggcgcg
gaaaatgcctcagaggcactgctcgccatcgtaccaatctccacagccctccaagagatt
catgagggcattttgtcgctgacgccagccgaccttatcgatgcgatcatccttctccct
gagctcaatcgccacatcgaaagttggggcgatgtgccggcgcgtctcgatgatctcgaa
gcgcttcgcggcttcgctcggagctatgaggaaagctgcgcgggcgagggatctcctgcg
acgccttcggggctggcactcgcgttggctgcagagaacccagcccgcccgcgaagcctt
cgggacgatgctgttaaagtcatgacctaccatggagcgaaggggcttgaatggcccgtc
gtaatcctgactgggctaggcaaagaaccaaagcctcgactgttcgaacccatggccgag
gctgatggtgacgtggattggcaaaatcctctcgtcggacgctggatccgctattggcct
tggccatatgcgagccaagaaaaggacgtatatctcgattcttcagcgcccagttcggcg
cttgggcaacgggctgcgatccgatcgagggatgaggaggcccgccttctttacgtcggc
atgacccgcgctcgcgatcatcttgtgtttgcggctccagctaaggggacacttcactgg
ttgaaggttctcgatggggacgaaacggagcatttcgctctaccacgcagcggaggcgaa
gaaatccatgcggggacgaaaacttttcctgcaagaacagcaacgctggtgtgcggtgaa
ggcggggagtctcaacctccggttgtatcattcggacgcatcgcgcggccagcgacgcac
cgagcgccgctttatcgtcgccctagcgaggcttccagcagcgaaaccttcatcatcgta
gagaaatcgacgatcggcccgcgtttgccgttcgcaggcagcccagacatgaccctgctc
ggcgaagccgtgcacgctatcattgcggcagatcaacctcacgattcgtatgatgcccgg
cttattcaagcacaggcgatcctcgatcgctggggggtgcatcaggttgccgcaaaggac
gtgctggaagccaatgagcggctgttcgctgagatctcgaagcgatggccgagcggccga
attcatcgcgagaccccagtttccgcccggatcggagatcagcttgtaacgggtcgcatc
gatttactggttgaacatgacagcggcttcgccatcatcgatcacaaatccttcccaggt
tcgccggatagctgggatgcccgagcggtcgggcacggctcgcaaatccagctctacgct
gacgcgctcgacaaggcccggcctggtgttccctgcgaactattcatccacatgccgata
gtcggaggccttctgcaggtgggcaccagttcatgctga
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