Sphingobium sp. MI1205: K663_02560
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Entry
K663_02560 CDS
T04383
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K663_02560 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_02560 (recF)
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K663_02560 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_30
AAA_22
ABC_tran
SbcC_Walker_B
AAA_29
AAA_25
nSTAND3
AAA_27
AAA_16
AAA_18
Aq_aa27
Motif
Other DBs
NCBI-ProteinID:
AMK16901
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Position
1:534998..536068
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AA seq
356 aa
AA seq
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MIGRLTLSDFRNHADALILPDHAFIVLTGENGAGKTNILEAVSMLAPGRGLRGAALRDMA
RQGGAGSFGIAAEVDGVVLGTGTSPQAPDRRQVRIGGVSSSANALADHLAIMWLTPAMDR
LFMDSPGGRRRFLDRLTLALHPGHAVHSARYEAAMRARNRLLNDLQSADPAWLTALEAQM
DEHAAAISAARGDLVARLGQQLAGQPDEPFARPLVAIEGEDGGEGPLGPRLARERRRDAA
AGRTLSGPHRQDLAVTHAAKGQAAALCSTGEQKALLLSILLAHAALVAAHRGQPPVLLLD
EVAAHLDPSRRAALFERLTETGGQVWMTGTESSLFNDLGHATRFTVTSGRLFRSAD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccgcctgaccttaagcgatttccgcaatcatgcggacgcgctgatcctgccc
gatcacgccttcatcgtgctgaccggcgaaaatggggcgggcaagaccaatatattggag
gctgtgtcgatgctggctcccggtcgcggcctgcggggcgctgcgctgcgtgacatggcg
cgacagggcggggccggcagcttcggcatcgcggcggaggtggatggcgtggtgctgggc
accggcacatcgccccaggcgcccgaccggcggcaggtgcggatcggcggcgtgtcctct
tcagcgaatgcgctggccgatcatctggcgatcatgtggctgaccccggcgatggaccgg
ctgttcatggacagtccgggcgggcggcggcgcttccttgaccggctgacgctggcgttg
catccggggcatgccgtgcacagcgcccgctatgaagccgcgatgcgcgcacgcaaccgg
ttgctgaacgatctccaaagcgcggacccggcctggttgacggcgctggaagcgcagatg
gacgagcatgccgccgcgatttccgccgcgcggggcgatctggtcgcgcggctggggcag
cagcttgcgggacagccggacgaaccctttgcccggcccttggtggcgatcgagggagaa
gatgggggcgaggggccgctcggcccacgcttggcgcgggagcggcggcgcgatgcggca
gcgggacgcacattgtccggaccgcaccggcaggatctggctgtcacccatgctgccaag
gggcaagcggctgcgctctgttcaacgggcgagcagaaggcgctgctcctgtcgatcctg
cttgcccatgcagcgttggtcgccgcacatcgcggccagccgccggtgcttctgctcgac
gaagtggccgctcatctcgacccgtcgcgacgggctgcgttgtttgaaaggttaacggaa
acgggcggtcaggtctggatgacgggaactgaatcaagccttttcaatgacttgggtcat
gccacgcgatttaccgtaacatcgggtcgattgtttcgttccgcagattaa
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