KEGG   Sphingobium sp. MI1205: K663_02560
Entry
K663_02560        CDS       T04383                                 
Symbol
recF
Name
(GenBank) recombination protein F
  KO
K03629  DNA replication and repair protein RecF
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    K663_02560 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spmi03400]
    K663_02560 (recF)
DNA repair and recombination proteins [BR:spmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     K663_02560 (recF)
SSDB
Motif
Pfam: SMC_N AAA_21 AAA_23 AAA_15 AAA_30 AAA_22 ABC_tran SbcC_Walker_B AAA_29 AAA_25 nSTAND3 AAA_27 AAA_16 AAA_18 Aq_aa27
Other DBs
NCBI-ProteinID: AMK16901
LinkDB
Position
1:534998..536068
AA seq 356 aa
MIGRLTLSDFRNHADALILPDHAFIVLTGENGAGKTNILEAVSMLAPGRGLRGAALRDMA
RQGGAGSFGIAAEVDGVVLGTGTSPQAPDRRQVRIGGVSSSANALADHLAIMWLTPAMDR
LFMDSPGGRRRFLDRLTLALHPGHAVHSARYEAAMRARNRLLNDLQSADPAWLTALEAQM
DEHAAAISAARGDLVARLGQQLAGQPDEPFARPLVAIEGEDGGEGPLGPRLARERRRDAA
AGRTLSGPHRQDLAVTHAAKGQAAALCSTGEQKALLLSILLAHAALVAAHRGQPPVLLLD
EVAAHLDPSRRAALFERLTETGGQVWMTGTESSLFNDLGHATRFTVTSGRLFRSAD
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgatcggccgcctgaccttaagcgatttccgcaatcatgcggacgcgctgatcctgccc
gatcacgccttcatcgtgctgaccggcgaaaatggggcgggcaagaccaatatattggag
gctgtgtcgatgctggctcccggtcgcggcctgcggggcgctgcgctgcgtgacatggcg
cgacagggcggggccggcagcttcggcatcgcggcggaggtggatggcgtggtgctgggc
accggcacatcgccccaggcgcccgaccggcggcaggtgcggatcggcggcgtgtcctct
tcagcgaatgcgctggccgatcatctggcgatcatgtggctgaccccggcgatggaccgg
ctgttcatggacagtccgggcgggcggcggcgcttccttgaccggctgacgctggcgttg
catccggggcatgccgtgcacagcgcccgctatgaagccgcgatgcgcgcacgcaaccgg
ttgctgaacgatctccaaagcgcggacccggcctggttgacggcgctggaagcgcagatg
gacgagcatgccgccgcgatttccgccgcgcggggcgatctggtcgcgcggctggggcag
cagcttgcgggacagccggacgaaccctttgcccggcccttggtggcgatcgagggagaa
gatgggggcgaggggccgctcggcccacgcttggcgcgggagcggcggcgcgatgcggca
gcgggacgcacattgtccggaccgcaccggcaggatctggctgtcacccatgctgccaag
gggcaagcggctgcgctctgttcaacgggcgagcagaaggcgctgctcctgtcgatcctg
cttgcccatgcagcgttggtcgccgcacatcgcggccagccgccggtgcttctgctcgac
gaagtggccgctcatctcgacccgtcgcgacgggctgcgttgtttgaaaggttaacggaa
acgggcggtcaggtctggatgacgggaactgaatcaagccttttcaatgacttgggtcat
gccacgcgatttaccgtaacatcgggtcgattgtttcgttccgcagattaa

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