Sphingobium sp. MI1205: K663_05555
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Entry
K663_05555 CDS
T04383
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K663_05555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_05555
Enzymes [BR:
spmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K663_05555
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K663_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF4192
RPA_interact_N
Motif
Other DBs
NCBI-ProteinID:
AMK17496
UniProt:
A0A126R670
LinkDB
All DBs
Position
1:1157986..1158312
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AA seq
108 aa
AA seq
DB search
MESLPLHGADLTRLAGTANADIMAEDSKTEQDDLSQLSFEDALRALETIVRRLESGDVPL
DESISLYAQGEELRKRCLERLQAAEARIQKLTIDTTGAVTGAQPFGAD
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgctacccttgcacggtgcggacttgaccaggctggcaggcaccgccaatgca
gacatcatggccgaggacagcaagactgaacaggacgatttgtcccaattgtcgtttgag
gatgcgctgcgtgcgcttgagacgatcgtacgccgtttggaaagcggcgatgttccgcta
gatgaatcgatctctctctacgcgcagggcgaggaactgcgcaaacgctgcctggaaagg
ctgcaggcggcggaggcgcgcatccagaagctgacgattgatacgaccggcgccgtcacg
ggcgctcagccgttcggcgccgattga
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