Sphingobium sp. MI1205: K663_07120
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Entry
K663_07120 CDS
T04383
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K663_07120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_07120
Enzymes [BR:
spmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K663_07120
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K663_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMK17805
UniProt:
A0A126R831
LinkDB
All DBs
Position
1:1490519..1491202
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AA seq
227 aa
AA seq
DB search
MTLQSPIAHAEAPLDCPLCPRLATLREACRAEHPDWWNAPVPAFGDPQARIVVVGLAPGK
QGANRTGRAFTGEFSGDLLFATLAKFGLTEGRYEARADDGLVLKDVVIVNAVKCLPPENK
PLPQEAHNCRLFLKSAVAALPDAHIFVALGEVAHQSVVKVLGGKLPKARFAHLAEHRMPS
GKIVIDSYHCSRRNMMTGRLTEEMFSAVFEKATALLDEGAASGQRIR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcaaagccccatcgcgcatgctgaagcgccgctcgattgccccctgtgcccg
cgcctcgccacattgcgggaggcatgccgggcggagcatccagattggtggaacgcgcca
gtcccggcgttcggcgatccacaggcgcggatcgtggtggttgggctggcaccgggaaag
cagggcgccaatcgcaccggccgcgcttttactggcgaattttcaggggatctgcttttt
gcgacgcttgcaaagttcgggctgacagaggggcgctatgaagcaagagccgacgatggt
ctggtgctgaaggatgtcgttatcgtcaacgcggtcaaatgccttccgcccgaaaacaag
ccgctgccgcaggaagcgcataactgccgacttttcctgaaatccgcagtcgcggctttg
cctgacgcccatatatttgtcgcgctgggggaggtcgcccaccagtcggtcgtgaaggtg
ctggggggcaagctgccaaaggcgcgctttgctcatctggcggaacacaggatgccaagc
ggcaagatcgtcatcgacagctatcattgctccaggcgaaacatgatgacgggccgtttg
accgaagagatgttctccgccgtctttgaaaaggccacggcgttgctggatgagggcgcg
gcgtccggtcagcgcatcagatag
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