Sphingobium sp. MI1205: K663_07270
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Entry
K663_07270 CDS
T04383
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spmi03032
]
K663_07270
03036 Chromosome and associated proteins [BR:
spmi03036
]
K663_07270
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_07270
DNA replication proteins [BR:
spmi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K663_07270
Chromosome and associated proteins [BR:
spmi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K663_07270
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K663_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Utp8_C
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AMK17835
LinkDB
All DBs
Position
1:complement(1520809..1521096)
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AA seq
95 aa
AA seq
DB search
MIRSELIQTLAEENPDLGLQEVERIVDLFFREIVDRLSNGGRVELRGFGAFTTRARDART
GRNPRTGEQVPVSAKRVPYFKPGKEMRERLNSKAH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctcggaattgatacagactctggcagaggaaaatccggacctcggacttcaa
gaggtcgaaaggattgttgatctcttcttcagggagatcgtggaccgcctttcaaacggc
ggcagggtggaactgcgcggttttggcgcgttcaccacgcgcgcgcgcgatgcgcgcaca
ggacgcaatccgcgcacgggggagcaggtgccggtgtccgcgaagcgcgttccttatttc
aaaccaggcaaggaaatgcgggagcgcctgaacagcaaggcgcactga
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