Sphingobium sp. MI1205: K663_07635
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Entry
K663_07635 CDS
T04383
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_07635
Enzymes [BR:
spmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K663_07635
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K663_07635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cytochrom_B558a
Motif
Other DBs
NCBI-ProteinID:
AMK17908
UniProt:
A0A126R775
LinkDB
All DBs
Position
1:complement(1599262..1602234)
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AA seq
990 aa
AA seq
DB search
MGDRTRPALFNIPAHRAFSDALAAGIIAQHGGDAMALAQGMILLPTNRAIRAVSDAFVRR
SGGGLLLPRLVAIGDPDLGEQAGGALDPLGEGDAIPPAITPMRRQMILARMVQQASGQPI
DAAQAIKLGQALGAVLDQMQVERVAITALADLSLSDELSGHWQRSLDLFSILIRRWPEEL
ARLGLIDLADRRNRLFDRLAARWGIEPPSGFVIAAGIATTAPAVASLLRRIATLPRGNVV
FAGLDQEMGEDAWDAIGPFPADPITGRAPAGHETHPQYALKRLLDRMSATREDVALWRWG
SEHDARAVRGRNISNAMLPPRLTSRWRDLKTADRSLGGVEALEVATPGEEAQAIAIALRE
AIETPGRTAALVTPDRQLATRVSAHLARWGIAADDSAGVPLSRLPPGTLLIALAEAVAER
FAPVALLTLLKHPLVMRGEERLPWLEGVRGLDLLLRGPRPPAGLQGIDMLLAEREGEDRQ
RNLRAAVLQWWQTARTLLLPLEQILTSAPNFLTQLATIRDRAGALTGDAVWAGAQGRAAA
DLFAEMEQAVAEGPQQADIRSLPVLLDHLLGGVSVRPVQGGHPRIAILGLIEAQLVQADV
MILGGLNEGTWPGLPSPDPWLAPRIRRELGLPGLESRIGRAAHDFASALGAPHVLITRAK
RGASGPAVASRFWLRLKAMAGPQWKSADRYAALAHALDRPAVHKPSRRPAPVPPASVRPK
LIPVTDVDRLKADPYAFYAKRILRLNRLDPIDADAGPAWRGTAVHEILQHWAEAGRDPAD
LEARARAMFDRPDVHPLLKALWQPRLIEAIRWIAAEVAADQAAGRTILAVESDGRADIAG
VTLTGKADRIDRMPDGSLAIVDYKTGKPPSAKQVRAGYSLQLGLLGLIAEQGGFAAVDGD
RRAGCFEYWSLAKKNDAFGYRDSPVDPMGKRDKIVTADFTSFVHARFEEVAAAYLTGQAP
FDAQVNPEVASYGDYDQLMRLEEWYGRDDG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcgcacccggccagccttgttcaacattcccgcgcatcgcgctttttccgat
gcgttggccgccgggatcatcgcccagcatggtggcgacgccatggcactggcgcagggg
atgatcctgctgcccaccaaccgcgccattcgcgccgttagcgacgccttcgtccgtcgg
tctggcggtgggctattgctgccgcggctggtggcgatcggcgatccggaccttggcgaa
caggctggcggtgcgctggacccgttgggcgagggggacgcgatcccgcctgcgattaca
ccaatgcggcggcagatgatcctggcgcggatggtccaacaggcgtccggtcaaccgatc
gacgcggcgcaggcgatcaagctcggccaagcgctaggggcggtgctggaccagatgcag
gttgagagggtggcgattaccgcgcttgccgatctatctctttctgatgagctttccggc
cattggcaaaggtcgctcgacctgttctccatcctcattcgccgctggccagaggaactg
gctcggcttggccttatcgacctcgccgatcgccgcaaccgcctgttcgatcggttggcg
gcgcgctggggtatcgagcctccgtcgggcttcgtcatcgccgctggtatcgccaccacc
gcgcccgccgttgccagcctgctgcgacgcatcgccacactgccgcgcggcaatgtcgtg
ttcgccgggctggatcaggaaatgggcgaggatgcatgggatgccattggcccattcccc
gctgacccgatcaccggtcgcgcccctgcgggacatgaaacacatccccaatatgccttg
aagcgcctgctcgaccgaatgagcgcgacccgcgaagatgtcgcactctggcgctggggc
agcgagcatgacgctcgcgccgttcgtggccgcaatatttccaatgcgatgctgcctcct
cgcctcacgagcagatggcgtgacctcaagaccgccgaccgctcgctgggcggtgtcgaa
gcgttggaggtggccacacccggcgaagaagcgcaggcgattgcgattgccctgcgcgaa
gctatcgagacaccggggcgcaccgctgctctggtgacgccggaccgtcaactcgctacc
cgcgtttctgctcatctcgctcgatgggggatagctgccgatgattccgcgggcgtgccc
ttatctcgcctgccgcccggcaccttgctgattgcgcttgctgaagcggttgcagagcgc
ttcgcgccggtcgcgctgctcaccctgctgaaacatccgctggtcatgcgcggtgaggag
cgtttgccctggctggagggcgtgcgcgggctggacctgttgctacgcggcccgcgtcct
ccggcaggccttcagggcatcgatatgctgttggctgagcgggagggtgaggatcgtcag
cgcaatctgcgcgccgcagtgctgcaatggtggcagactgcgcgcacattgctccttccc
ctggagcagatattgacgtcagctccgaattttctcacgcagttggcaacaatccgggat
cgggccggggcattgaccggcgatgcggtctgggccggcgcgcagggccgcgcggcggca
gatctgtttgcggaaatggagcaagccgtcgcggaaggaccgcagcaggctgatatccgc
tcgctccccgtgcttctcgaccatctgctcggtggcgtgtctgtccgcccggtgcagggt
ggccatccccgcattgcgatattgggcctgatcgaggcgcaactggtgcaggctgacgtc
atgattctgggcggccttaacgagggcacatggcccggcctgccgtcgcccgacccgtgg
ttggctccgcgcataaggcgtgagcttggccttcccggattggaaagccgcatcggtcgg
gcggcccatgactttgcgagcgctctgggagcgccgcacgttcttatcacgcgggcaaaa
agaggggccagcggtcctgctgtcgcatcccgcttctggctgcggttgaaggccatggct
ggaccacaatggaaaagcgctgatcgctatgccgctctcgcgcatgcgctggatcgcccg
gccgttcacaagcccagccgacgtcccgcgccagtgccacccgcctccgtccggccaaag
ctgatcccggttacggatgtcgatcgcttgaaggctgacccttatgctttctacgccaag
cgcatcctgcggctgaaccggcttgatccgatcgacgccgacgcgggcccggcctggcgt
ggtacggctgtgcatgaaatcctccagcattgggcggaggcgggacgcgatcctgccgac
ttggaagcccgtgcccgcgccatgttcgaccggcccgatgtccacccgctgctcaaggct
ttgtggcagccccgcctgatcgaagcgatccgctggatcgccgcagaggtcgcagccgat
caggctgcgggccgcacgatattggcagttgaaagtgacggcagggcggatatcgcgggc
gtcaccctgaccggcaaggccgaccggatagaccgtatgccggacggttccctcgccatc
gtcgattacaagaccggtaaaccgcccagcgcgaagcaggtgagggcaggctattcctta
cagctgggactgcttggcctgatcgccgaacagggaggattcgcagcggtcgatggcgac
agaagggcgggatgtttcgaatattggtcgctcgccaaaaagaatgacgctttcggctat
cgtgacagccccgtcgatccgatgggcaagcgagacaagatcgtcacggcggacttcacc
tctttcgttcacgcccggtttgaggaggtagcagcggcctatctgaccggtcaggcgccg
tttgacgcccaagtgaaccccgaagtcgccagctatggggattatgaccagctcatgcgg
ctggaagaatggtatgggcgcgacgatggctag
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