Sphingobium sp. MI1205: K663_07880
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Entry
K663_07880 CDS
T04383
Name
(GenBank) TrmA family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spmi03009
]
K663_07880
Enzymes [BR:
spmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
K663_07880
Ribosome biogenesis [BR:
spmi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K663_07880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
MTS
Motif
Other DBs
NCBI-ProteinID:
AMK17957
UniProt:
A0A126R745
LinkDB
All DBs
Position
1:complement(1657020..1658228)
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AA seq
402 aa
AA seq
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MTLIDTDLVVRIAAKGDGVTADGRHVHLAAPGDRLTANGDLLPGPHHVEPPCIHFSSCGG
CELQHVDEESLSAFVTARVTGPLAGQGVKPRTVSLTHISPPRTRRRASLRAAREGRRVTI
GFAEAGSHKLIDLAMCEILDARIFALLEPLRTMLPLILPDKRAAHVRMSVIDQGIDLLLE
GVRVEGLAADEALRDFAAAWKLARLTIDEGDGQQLRWEPEPVTASFGGVAVGFPPFAFLQ
ATPDGEAALVEFVRRALPAQGAVADLFCGLGTFALAIGEGRPVYAAEGARDLVLSLKLAA
NRVQRRMVVDHRDLFRRPLTPEELNRFAAVVIDPPRAGAREQVMQLAASRVSVIAYVSCN
PASFARDAAHLVAGGYMLESVKPVGQFRWSTHVELAAIFRRP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgactcttatcgacactgatctcgtcgtccgcatcgccgcgaagggcgatggcgtgacc
gccgacggccggcatgtgcatcttgccgcgccgggggatcggctgacggcgaacggtgac
cttctgcctggcccccatcatgtcgagccgccctgcattcacttctcgtcttgcggtgga
tgcgaacttcagcatgtcgatgaggagagcctttcagcgttcgtcaccgcgcgtgttact
ggccctcttgcgggacagggcgtgaagcctcggacagtctcgctaactcacatctcaccg
ccgcgaactcgaaggcgggcgtcgctgagggctgcgcgtgaggggcggcgtgtcaccatc
ggattcgcagaggcgggtagccacaagctgatcgatctggccatgtgcgaaattctggac
gcgcgcatcttcgccttgctggagcctctccgcacgatgctgccgctgatcctgccggac
aagcgtgcggcgcatgtgcgcatgtcggtgatcgaccagggcatcgaccttttgttggaa
ggcgtccgcgtggaggggctggcggcggacgaagcgctgcgggatttcgcggcggcctgg
aagctggcccggctgacgatcgacgagggtgacggccagcaactgcgctgggagcctgaa
ccagtgacggcgagttttggcggcgtcgcagtcggttttccgcccttcgccttccttcag
gccacgccggatggcgaggcagcgctggtagagttcgtccgtcgggccttgcctgcgcag
ggggctgtagctgacctcttttgtgggcttggcacctttgcgctggcgataggggaaggg
cggccggtctacgcggccgaaggcgcccgtgacttggtcctgtcactcaaactggcggcg
aaccgggtgcaacggcggatggtggtggatcatcgcgacctgttccgtcggccgctgacg
ccagaagaactgaaccgctttgccgccgtggtgatcgacccgccccgggcgggcgcgcgc
gaacaggttatgcagttggcggcgtcaagggtgtccgtgatcgcctatgtgtcttgcaac
ccggcgagctttgcgcgggatgcggcgcatctggttgctggcggctatatgctggaaagc
gtgaagccggtcgggcagttccgctggtcaacgcatgtggaactggccgccatcttccgt
cgcccataa
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