KEGG   Sphingobium sp. MI1205: K663_10375
Entry
K663_10375        CDS       T04383                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K663_10375
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spmi02044]
    K663_10375
   02035 Bacterial motility proteins [BR:spmi02035]
    K663_10375
Enzymes [BR:spmi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     K663_10375
Secretion system [BR:spmi02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   K663_10375
Bacterial motility proteins [BR:spmi02035]
 Pilus system
  Pilus assembly proteins
   K663_10375
SSDB
Motif
Pfam: T2SSE ABC_tran AAA_16 AAA_29 AAA_23 FtsK_SpoIIIE Zeta_toxin AAA_7 AAA_19 AAA_28 AAA_2 nSTAND_NTPase5 DEAD AAA_30 nSTAND3 cobW TrwB_AAD_bind AAA_SelU AAA_22 ORC-CDC6-like ResIII Sigma54_activat AAA_5 UvrD-helicase Mg_chelatase ATPase TsaE KAP_NTPase HTH_47 PIF1 ATP_bind_1 NACHT SRPRB COX8 SLFN-g3_helicase DUF4847 P-loop_TraG
Other DBs
NCBI-ProteinID: AMK18453
LinkDB
Position
1:complement(2143625..2144983)
AA seq 452 aa
MWQIRKGENRPGDRDDVGPTDTELVHWEEDRHTELKVALHQKLIDLINLSALENMSRAQV
EAEVGEIVHEQLALQKHALNLEERRRLVSDILDELLGLGPLEPLLKDHSVTDILVNGYKC
VFVERSGRLVETATRFKDEKHLLRIIQKIVAAVGRRVDESSPFVDARLADGSRVNAVVPP
LAVDGSLLSIRKFAKVPISMARLSELGSVPAPMAQVLSAVVASRRNVLISGGTGSGKTTL
LNAMSASIDEAERIVTIEDSAELQLQQRHVARLETRPPNIEGRGEVTQRDLVKNALRMRP
DRIIVGEVRAGEAFDMLQAMNTGHDGSMTTVHANTPRDALSRVEQMIGMSGIDISPRSAR
AQIASALNVIVQVGRLSDGRRRLLSISEITGMEGEVITMQEIFRFKMTGRDENGMVRGHF
EATGIRPKFMGELADRGISLPAELFRPDAVVQ
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtggcagatccgaaaaggcgagaaccggccgggcgaccgtgacgatgtggggccgact
gatacggaactggtccattgggaagaggaccggcataccgagttgaaggtcgcgctgcac
cagaagctgatcgacctgatcaacctgtccgcgctggagaatatgtcgcgcgcgcaggtg
gaagcggaagtgggcgagatcgtccatgaacagctggctttgcagaagcacgcgctcaac
ctggaggaacggcggcggctggtttcggacatattggacgagctgctggggctggggcca
ttggagccgctgctgaaggaccatagcgtcaccgacatattggtgaacggctacaaatgc
gtcttcgtcgagcggagcgggcgtctggtggagacggcgacgcggttcaaggatgaaaag
catctgttgcgcatcatccagaagatcgtggcggcggtgggcaggcgcgtggatgaatcc
tcgccgttcgttgacgcgcggctcgcggacggttcgcgcgtgaacgcggtggtgccgccg
ctggcggtcgatggatcgctgctgtcgatccgcaagttcgccaaggtgccgatcagcatg
gcgcggctgtccgaactgggcagcgtgccggcgccgatggcgcaggtgctgtcggccgtg
gtcgcatcgcggcgcaacgtgctgatttcgggcggtacgggttcgggcaagaccacgctg
ctcaacgccatgtcggcgagcatcgacgaggccgagcggatcgtgaccatcgaggattcg
gccgagcttcagttgcagcagcgccatgtcgcgcggctggaaacgcggcctccgaacatc
gaggggcggggcgaagtgacccagcgcgacctggtgaagaatgcgctgcgcatgcggccc
gaccgcatcatcgtgggcgaagtgcgcgccggggaggcgttcgacatgctccaggcgatg
aacacgggccatgacgggtcgatgacgacggtccacgcgaacacgccgcgcgacgcgctg
tcccgcgtggagcagatgatcggcatgagcggcatcgacatttcgccgcgttcggcgcgg
gcgcagatcgcgtcggcgctgaacgtcatcgtgcaggtggggcgactgtccgacggacgc
cgccgcctgctgagcatttcggagatcacgggcatggaaggcgaggtcatcaccatgcag
gaaatcttccgcttcaagatgacgggccgtgacgagaatggcatggtgcgcggccatttc
gaggcgaccggcatccggcccaaattcatgggcgagctggccgaccggggcatcagcctg
cccgccgagcttttccgtcccgatgcggtggtgcaatga

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