Sphingobium sp. MI1205: K663_11065
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Entry
K663_11065 CDS
T04383
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
K663_11065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmi03400
]
K663_11065
DNA repair and recombination proteins [BR:
spmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
K663_11065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AMK18593
LinkDB
All DBs
Position
1:complement(2298366..2299244)
Genome browser
AA seq
292 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHEPSGKRVRYEKTVPGLGPVKPE
DIVKGFEVSKGDYVLLQPEEIEAVKLESKKTLELTQFVDADEIDVLYYERPYYVVPADDL
AEEAFVVLREALRRAKKVGLGQLAMRGREYIVSLKPCGRGMVLETLRYADEVNRAQSYFR
EIEDVKPDPELLDLAEALIEKKTAPFKPDSFHDRYVDALERLIEKKKKAKGRRIIEDEAD
APVKRSGNVIDLMAALKKSVDSGGQKAPAKGAPKKPAARRAAPSKAPARKRA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcgcatattggcaggggcagatcaggctggcgctggtgtcgatcccggtc
gaaatctacgccgcgaccaagtcgggcgcccagatcgcctttcaccagattcacgagccg
agcggcaagcgcgtgcggtatgaaaaaaccgtgccgggccttggtcccgtaaagcccgaa
gatatcgtcaaaggctttgaggtgagcaagggcgactatgttctcctgcagcctgaggag
attgaggcggtcaagctggagagcaaaaagacgctagagctgacacagttcgtcgatgcg
gacgaaatcgacgtcctttattatgagcggccctattatgtcgtccctgctgatgatctg
gccgaagaagcctttgtcgtgttgcgggaagcccttcgccgcgcgaagaaggtcgggctt
ggtcagcttgccatgcgcggccgcgaatatatcgtctcgctcaagccgtgcgggcgcggc
atggtgctggaaacgctccgctacgctgacgaggtcaaccgggcccaatcctattttcgt
gaaatcgaggatgttaagcccgacccggagttgctggaccttgccgaggcattgatcgag
aagaaaaccgcgccattcaagcctgacagtttccatgatcgctatgtcgatgcgttggaa
aggctgatcgagaaaaagaagaaggcgaagggccgccgaatcatcgaggatgaggccgat
gcgcccgtcaagcgcagcggcaatgtcatcgaccttatggccgctctcaaaaagtcggtc
gatagcggtggccagaaagcgcccgccaagggcgctccgaaaaaacctgcggcccggcga
gccgccccgagcaaggcccccgcgcgtaaacgagcctga
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