Sphingobium sp. MI1205: K663_11145
Help
Entry
K663_11145 CDS
T04383
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spmi03009
]
K663_11145 (rimO)
Enzymes [BR:
spmi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K663_11145 (rimO)
Ribosome biogenesis [BR:
spmi03009
]
Prokaryotic type
ribosomal protein modification factors
K663_11145 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AMK18609
UniProt:
A0A126R963
LinkDB
All DBs
Position
1:2314771..2316177
Genome browser
AA seq
468 aa
AA seq
DB search
MTFGTKIPMCAPIMATKIPEPPKVGMVSLGCPKALVDSERILTKLRSDGYQMSADYAGAD
VVLVNTCGFLDSAKAESLEAIGEAIAENGRVIVTGCMGNEAELIRQKFPQVLAVTGAHQY
EQVVNAVHEASPPVPNAFVDLVPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSIRGDLV
SRRVDAVLREAEKLVHAGTKELLVISQDTSAYGVDTRHEPRNWKGREVRAHMTDLARELG
QLRTAEGHAPWVRLHYVYPYPHVDHVIPLMAEGLLTPYLDIPFQHASPNVLKAMKRPANE
AKVLDRIRKWRGICPDISIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEG
AAANDLPGAVPEAVKEERYQRIMEKTAAISAAKLAAKVGRVLPVILDEVGEPDEDGSIGA
TARSQADAPEIDGNVFLRDVGEGRKAGDVFDVRIEDADEHDLYGVPVA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgacatttggcacgaaaatccctatgtgcgcgccgatcatggcaaccaaaattcccgaa
ccgccgaaggtcggcatggtgtctctgggctgtcccaaggcactggtcgatagcgagcgc
atccttaccaagctgcggtctgacggatatcagatgtccgccgattatgcgggggctgac
gtcgtgctggtcaacacctgcggtttcctcgattcggctaaggcagaatcgcttgaggcg
atcggcgaggcgattgccgaaaatggccgcgtcatcgttaccggctgcatgggcaatgag
gcggagttgatccgccagaaattcccccaggtgctggcggtcactggcgcgcatcaatat
gaacaggtggtcaacgccgtgcatgaggcttcaccgcccgtgcccaatgcctttgtcgat
ctggtgcccgaaggcggcctgaagctgacaccccggcattacagctatctgaagatctcg
gaaggctgcaaccatcgctgttccttctgcatcatcccttcgatccgtggcgacctggtt
tcgcggcgcgtggacgcggtgctgcgtgaagcggaaaaactggtacatgccgggacgaag
gaactgctggtcatcagccaggacacatcggcctatggcgtcgatacccggcacgagccg
cgcaattggaagggccgcgaagtccgcgcgcacatgaccgacctagcccgtgaacttggt
caattgcgcacggccgaaggtcatgcgccttgggtgcgcctgcactatgtctacccctac
ccccatgtggatcatgtgatcccgctgatggccgaggggctgctgaccccctatctcgac
attccgtttcagcatgcatcccccaacgtgctgaaagccatgaaacgcccggcgaacgag
gccaaggtgctggaccgtatccgcaagtggcgaggcatttgccccgacatctcgatccgg
tcatctttcgtcgtcggcttccccggcgagacggaagcggacttccaatatctactcgac
tggctggatgaggcgcaattggaccgcgtaggcgctttccgcttcgaaccggtcgagggc
gccgctgccaatgatctgcccggcgcggttccagaagcggtgaaggaagagcgttaccag
cggatcatggaaaagaccgccgcgatcagcgccgcgaagctggccgcgaaagtcgggcgg
gtgctgcccgtcattctggatgaggtcggcgaaccggacgaagatggatcgatcggcgca
accgcgcggagccaggcggatgcgccggagatcgacggcaatgtcttccttcgcgatgtc
ggcgagggccggaaagcgggcgacgtcttcgatgtaaggatcgaagatgccgacgagcac
gatctttacggggtgcccgtcgcataa
DBGET
integrated database retrieval system
