KEGG   Sphingobium sp. MI1205: K663_11260
Entry
K663_11260        CDS       T04383                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
spmi  Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spmi03016]
    K663_11260
Enzymes [BR:spmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     K663_11260
Transfer RNA biogenesis [BR:spmi03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    K663_11260
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AMK18632
UniProt: A0A126R9A0
LinkDB
Position
1:2336292..2336774
AA seq 160 aa
MGGVPGARWQDNDQLHLTLRFVGEADPRRADDLAAALATIRFAPFPISLSGVGQFDRRGR
IDALWAGVQPRDVLTQLHRKIDRACVDVGFPADQRAYLPHITLARFSRSGGVIDSFLSHN
AALSSPPFLVDSFILFESHLTQAGARYDVAALYPADPQRL
NT seq 483 nt   +upstreamnt  +downstreamnt
atgggtggcgttccgggcgcacggtggcaagacaatgatcagctgcacctcacgctgcgc
tttgtgggtgaagccgacccgcgtcgggctgacgatctggccgccgcgctggcgacgatc
cgcttcgccccgttcccgatctcgctgtcaggtgtcggccaattcgaccggaggggacgg
atcgacgccctgtgggccggcgtgcaaccgcgcgatgtcctcacccaactccaccgcaag
atcgaccgcgcctgcgtcgatgtcggatttccggcggatcaacgtgcctatctgccccac
atcacgctcgcccgattcagccgatccggcggcgttattgacagcttcctgtcccacaac
gccgcgctctccagccctcccttcctggtcgacagcttcattctcttcgaaagccatcta
acgcaggcgggagcgcgttatgatgttgccgctctctacccggcagacccgcagcggctt
tag

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