KEGG   Sphingobium sp. MI1205: K663_13940
Entry
K663_13940        CDS       T04383                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi00300  Lysine biosynthesis
spmi00470  D-Amino acid metabolism
spmi01100  Metabolic pathways
spmi01110  Biosynthesis of secondary metabolites
spmi01120  Microbial metabolism in diverse environments
spmi01230  Biosynthesis of amino acids
Module
spmi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    K663_13940 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    K663_13940 (dapF)
Enzymes [BR:spmi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     K663_13940 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AMK19166
LinkDB
Position
1:2831670..2832482
AA seq 270 aa
MRALMGRFSKMHGLGNDFVVIDARDGDVAMTQARAQAIADRHAGIGCDQLILIGRSDRAD
VSMRIFNSDGGEVEACGNATRCVPLFVGRDVLIETKAGLLDAKGVDGGASVDMGAPRLEW
DAIPLAYAMDTLAMPVSWEDLPAPAAVNVGNPHVIFFCDDLDAVDIERLGPMIETDPLFP
ARVNVNFAQVVGDNQIRLIVWERGAGLTRACGTGACATAVAAVRRKLVSGPTRVTLPGGD
LVIDWTPGGHILMTGPATHVFDGEADWARF
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcgcgcccttatgggccgtttttccaaaatgcacggattgggcaatgactttgtcgtg
atcgacgcgcgggatggcgatgtcgcgatgacgcaggcgcgcgcgcaggcgattgccgac
cgccatgccgggatcgggtgcgaccagttgatcctgatcggccggtcggatcgcgccgat
gtgtcgatgcgcatcttcaacagcgacggcggcgaagtggaagcctgcggcaatgccacg
cgctgcgtgcccctgttcgtcgggcgcgacgtgctgatcgagacgaaggcgggcctgctg
gacgcaaaaggcgtggatggcggcgcgagcgtcgacatgggcgcgccccggctggaatgg
gacgccatccccctcgcctacgccatggatacgctggccatgccggtgagctgggaggat
ctgcccgcacccgccgcagtcaatgtcggcaacccgcatgtcatcttcttctgcgacgac
ctggatgcagtggatatcgagcggttggggccgatgatcgagaccgatccgcttttcccg
gcgcgggtgaatgtgaatttcgcgcaggtcgtcggtgacaatcaaatccgcctgatcgtg
tgggaacgcggcgctggcctgacgcgcgcctgcggcacaggcgcttgcgcgaccgctgtg
gccgccgtgcggcgcaagctggtgagcggtcccacccgcgtcaccctgcccggcggcgat
ctggtgatcgactggacgccggggggccatatcctgatgaccgggcctgccacccatgtc
tttgatggcgaggctgactgggcccgcttttga

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