KEGG   Sphingobium sp. MI1205: K663_14145
Entry
K663_14145        CDS       T04383                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi03030  DNA replication
spmi03410  Base excision repair
spmi03420  Nucleotide excision repair
spmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K663_14145
   03410 Base excision repair
    K663_14145
   03420 Nucleotide excision repair
    K663_14145
   03440 Homologous recombination
    K663_14145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spmi03032]
    K663_14145
   03400 DNA repair and recombination proteins [BR:spmi03400]
    K663_14145
Enzymes [BR:spmi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K663_14145
DNA replication proteins [BR:spmi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     K663_14145
DNA repair and recombination proteins [BR:spmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     K663_14145
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K663_14145
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DprA_N HHH_5 HHH_2 HHH IMS_HHH
Other DBs
NCBI-ProteinID: AMK19207
UniProt: A0A126RAK7
LinkDB
Position
1:2865969..2868755
AA seq 928 aa
MSQNHLYLVDGSGYIFRAYHQLPPLTNKHGQPVGAVYGYTTMLWKLAEELGKAEGPTHLA
VVLDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
SYTKAAVAAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVMTKFGVQPEQLGDV
LALMGDSVDNVPGIPGIGPKTAAKLISEYGSLEAALEAAPSMKKSKMQENLIAHADMARL
SRRLVALHDGMDLPEPLEDLTLKGIPPEPLQNFLEHHGFKSLLTRLGAPAAAVAVATAAL
AVTESTPPGAPVLEEEPPIDRSLYETVVSEEALDRWIAAAHAEGFVAVDTETDMLDCVSC
ALVGISMAVGPNAACYIPVGHGGKDMFAEKPDQLPKDLVLAKLKPLLEDDSVLKIGQNLK
YDLTVMRRHGIEIAPYDDTIVMSFDLDAGQSLAGHGMDEAARTHLNHVCISFKDVCGSGK
NQISFAEVPLDKATEYAAEDADVTLRLWKIFKNRIANEGASRVYELVDRPLVSVIARMEH
EGIKVDREQLSRLSGEFTTEIAKLEGEIHEIAGQPFAIGSTQQLGAILFDKMGYKGGKKG
KSGAYSTDVTILEQLKAQGAEIAGKILDWRQLSKLKSTYTDALQAQINRDSSRVHTSYSL
SGAQTGRLSSTDPNLQNIPIRTEVGRQIRHAFVAEPGNVILAADYSQIELRLAAHIADVP
ALRDAFLAGEDIHAATAQQLFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEISADEAQ
DMISRYYERFPGISLYITETLEKARARGYTETLFGRKTWFPRIKAPIQHERQGAERAAIN
APIQGTSADIIKRAMVRMGPALAAEGLNDVKMLLQVHDELVFELPEGHVEQASAVIRRVM
ETAAEPIVKLSVPLGVEIGHGPSWGAAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtcccagaatcacctctatcttgtcgatggcagcggctatatcttccgcgcctatcac
cagcttccaccgctcaccaacaagcatggccagccggtcggcgcggtttatggctatacc
accatgctgtggaagctggccgaggaactgggcaaggcggaagggcccacccacctcgcc
gtggtactggacaagggcagccacaccttccgcaacgacatgtacgaccagtataaggcg
aaccgtccgcccgcgcccgaagacctggtcccgcaattcccgatgatccgcgacgcgacc
cgcgctttttcgctgccctgcatcgaggaagcgggtttcgaagccgacgacatcatcgcc
agctataccaaggccgccgtcgcggcgggatggcacgtgaccatcgtcagttccgacaag
gacctgatgcagctgatccagcccggcgtcgacatgtacgacacgatgaagaatgagcgg
cgcggcgcggactatgtgatgaccaagttcggcgttcagccggagcagttgggcgacgtc
ctggcgctgatgggcgacagcgtcgataatgtccccggcatccctggcatcggccccaag
accgccgccaagctgatcagcgaatatggcagcctggaagcggcgctggaagctgcccct
tcgatgaagaagtcgaagatgcaggaaaacctgatcgcccatgccgacatggcccgcctg
tcgcgcaggctggtggcgctgcacgacggcatggacctgccagagccgctggaggatttg
acgctcaagggcatcccgcccgagccgctccagaacttcctggaacatcatggcttcaag
tcgctccttacccgccttggcgcgcccgccgctgcggttgcggtagcgaccgccgcgctc
gccgttacggaatcgacaccgcccggcgcgccggttctcgaagaagaaccgccaatcgac
cgcagcctttacgagacagtggtgagcgaagaagcgctcgaccgctggatcgccgccgcg
catgccgagggcttcgtcgccgtcgataccgaaaccgacatgctcgattgcgtgtcctgc
gcgctggtcggcatcagcatggccgtcggccccaacgcggcctgctacatcccggtcggt
catggcggaaaggacatgttcgcggaaaagcccgaccaactgcccaaagacctggtcctc
gcgaagttgaagccgctgctggaggacgacagcgtcctcaagatcggccagaatctgaaa
tatgacctgacggtcatgcgccgccacggcatcgagatcgcaccctatgacgataccatc
gtcatgagcttcgatctggacgcaggacaaagccttgcgggccacggcatggacgaagcg
gcccgcacccacctcaaccatgtctgcatcagcttcaaggatgtctgcggcagcggcaag
aaccagatcagctttgccgaagtcccgctggacaaggcgaccgaatatgccgccgaagat
gcggacgtcacgctgcggctgtggaagattttcaagaaccggatcgccaatgaaggggcc
agccgcgtctatgaactggtcgatcgcccgctcgtttcagtgatcgcgcggatggagcat
gaagggatcaaggtcgatcgcgagcagctatcccgcctctccggggagttcaccaccgaa
atcgccaagctggaaggcgagatccacgagatcgcgggccagcccttcgccatcggatcg
acgcagcagctgggcgcgatcctgttcgacaagatggggtacaaggggggcaagaagggc
aaatccggcgcttattccaccgacgtcaccatccttgagcaattgaaggcgcagggtgcg
gagatagcgggcaagatccttgactggcggcagctatcgaagctcaaatccacctatacc
gacgcgcttcaggcgcagatcaaccgggacagcagccgcgtgcataccagctattcgctg
tccggcgcgcagaccggccgcctgtcctcgaccgatcccaatctccagaacatcccgatc
cgcaccgaagtcggccgccagatccgccacgccttcgtcgccgagccgggcaacgtgata
ttggccgcggactatagccagatcgaactgcgccttgccgcccacatcgccgatgtgccc
gcgcttcgggacgcatttcttgctggcgaggacattcacgccgccaccgcccagcaattg
ttcggagaggtcaatcgcgacacgcgcgggcgggccaagaccatcaacttcgcgatcctc
tacggcatatcccgctggggccttgccgggcggctggagatcagcgccgacgaagcgcag
gacatgatcagccgctattatgaacgcttccccggcatcagcctctatatcaccgagacg
ctcgaaaaggcgcgggcgcggggctataccgagacgctgttcggccgaaaaacatggttc
ccgcgcatcaaggcgcccatccagcatgagcggcagggcgccgaacgggccgccatcaac
gcgccgattcagggcacgagcgccgacatcatcaagcgagcgatggttcgcatggggcct
gcccttgctgccgaagggctgaacgatgtgaagatgctgctgcaggtccatgacgaattg
gttttcgagctgcccgagggccatgtcgaacaggcaagcgccgtcatccgccgggtcatg
gaaacggcggccgaaccgatcgtgaagctgagcgtgccgctgggcgttgaaatcgggcat
ggcccaagctggggggcagcgcattag

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