KEGG   Sphingobium sp. MI1205: K663_15500
Entry
K663_15500        CDS       T04383                                 
Name
(GenBank) AAA ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    K663_15500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spmi03019]
    K663_15500
   03009 Ribosome biogenesis [BR:spmi03009]
    K663_15500
   04131 Membrane trafficking [BR:spmi04131]
    K663_15500
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spmi04147]
    K663_15500
Messenger RNA biogenesis [BR:spmi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     K663_15500
Ribosome biogenesis [BR:spmi03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    K663_15500
Membrane trafficking [BR:spmi04131]
 SNARE
  SNARE associated proteins
   Others
    K663_15500
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    K663_15500
Exosome [BR:spmi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   K663_15500
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_5 AAA_22 CDC48_2 AAA_33 AAA_2 AAA_14 TIP49 IstB_IS21 NACHT nSTAND3 NPHP3_N RNA_helicase AAA_28 AAA_18 AAA_7 Mg_chelatase AAA_30 ABC_tran AAA_11 AAA_24 Sigma54_activat DUF815 TsaE AAA_3 AAA_17 Zeta_toxin AAA_25 AAA_lid_PRS2_C Parvo_NS1 NB-ARC ATPase SLFN-g3_helicase PhoH bpMoxR Vps4_C Sigma54_activ_2 Viral_helicase1 MazE_antitoxin
Other DBs
NCBI-ProteinID: AMK19478
UniProt: A0A126RBH1
LinkDB
Position
1:complement(3140356..3142650)
AA seq 764 aa
MAEQDSLERRIQVANARPEDAGRGLARIPLAVMAELQLAEGDVIEIVGKRSTSARVVRPY
KEDEGLDVLRLDGLQRANAGVGSGDFVHVSKVEPRPAQRVVFAPAQNNLRLQGNPDALKR
VFFQRPLAAGDIVATAGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTLPKGVVQID
ADTEIELRAEYEEPRELRRADVTYDDVGGMAEAIDQLREMVELPLRYPELFERLGVDPPK
GVLLHGPPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAATKSSPS
ILFIDEIDSIAPKRGNVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRR
PGRFDREIIVGVPDERGRREIMGIHTRGMPLDERVDLSELARMTYGFVGADLAALTREAA
IETVRRFMPRLNLEEGTIPPDVLEELSVTREDFMAAIKRVQPSAMREVMVQAPNIGWADI
GGLDDAQMRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPVRGGGLGEPAVTERV
VNTILAEMDGLEELQSVIVIGATNRPTLIDPALLRPGRFDELIYVPVPDKAGRRRILAIH
TGKMPLADDVDLDDLAERTERFTGADLEDLVRRAGLVALRQSLSVEKVGHAHFEAAMEET
RASVTPEMEREYEQIQTQLKQSAMRVEPIGFVSPDMLRSRERQS
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggccgaacaggacagcctggaacgcaggattcaggtcgcaaacgcgaggccggaggac
gcgggacgcgggcttgcgcgcattccgctggcggtgatggcggaactacagctggccgaa
ggcgatgtgatcgagatcgttggcaaacggtccacgtccgcgcgggtggtccgcccctac
aaggaagatgaagggttggatgtgctgcgcctggatggcctgcagcgtgccaatgccggg
gtaggatcaggcgacttcgtccatgtcagcaaggtcgagccacgcccggcccagcgcgtc
gtattcgcacctgcacaaaataatctgcggctccagggcaaccccgacgcactgaaacgc
gtcttttttcagcggcccctggcggccggtgacatcgtcgcgaccgccgggcagcagcaa
gtgccgccgggcgacatgccgccccagttgcgccagatgctggcggcgcccgcctatgcg
ctccaggaaatccggcttgtcgtcgtgtccaccctgcccaagggcgtggtccagatcgat
gcggacaccgaaatcgagctgcgcgccgaatatgaggagccgcgcgagcttcggcgggcc
gatgtcacctatgacgatgtcggcggcatggccgaggcgatcgaccagttgcgtgagatg
gtggaattgccgctgcgctatcccgaactgttcgagcggctgggcgtcgatccgcccaag
ggggtgctgctccatggcccgccgggaaccggcaagacgcggctggcgcgtgctgtcgcc
aatgaatcggaggcggagttcttcctgatcaacggccccgagatcatgggttcggcctat
ggcgagtccgaaaagcagctgcgcgagatatttgaggcggcgacgaaatcctcgccctcg
atcctgttcatcgacgagatcgattccatcgcacccaagcgcggcaatgtgaccggagag
acggaaaagcggctggtagcccagttgctgaccctgatggacgggctggagccgcgcacc
aatctggtcgtcatcgccgccacgaaccggcccgaagccatagacgaggcgctgcggcgg
ccgggccgtttcgaccgtgaaatcattgtcggcgtaccggacgagcgcgggcggcgcgag
atcatgggcatccatacgcgcggcatgccgctcgacgagcgcgtcgacctgagcgaactg
gcgcggatgacctatggctttgtcggcgccgacctggctgcgctgacccgcgaggcggcg
atcgaaacggtgcgccgcttcatgccgcgcctgaaccttgaggaagggacgatcccgccc
gacgtgctggaggaattgtccgtcacgcgcgaggatttcatggccgcgatcaagcgggtg
cagccgtccgcgatgcgcgaggtcatggtgcaggcgcccaatatcggctgggccgacatt
ggcggcctggacgacgcgcagatgcgcctgaaggaaggggtggaactgccgctgaaggat
ccggacgctttccgccggctgggtattcgcccggccaagggcttcctgctttatggtccg
cccggcaccggcaagacgctgctcgccaaggcggtcgcgcgcgaggcgcaggcgaacttc
atcgcgaccaagtcgagcgacctgctgtccaaatggtatggcgagagcgagcaacagatc
gcccgcctgttcgcgcgcgcgcggcaggtagcgccgaccgtcatcttcatcgacgaactg
gacagcctggtccccgtccgtggtggcggtctgggcgaaccggcggtgacggagcgggtg
gtgaacaccatcctcgcggaaatggacggcttggaagagttgcagtcggtgatcgtcatc
ggcgcgaccaaccggccgacgctgatcgaccccgcgctgttgcggccggggcggttcgac
gagctgatctacgtccccgtgcctgacaaggctgggcgcaggcgcatcctggcgatccat
accggcaagatgccgctggccgatgatgtcgatctggacgatctggccgagcggacggaa
cggttcaccggcgctgaccttgaggatctggtgcgtcgcgccggtttggtcgcgctgcgc
cagtcgctatcggtcgagaaggtcgggcatgcgcatttcgaagccgcgatggaggaaacc
cgtgcgtccgtcacgccggaaatggagcgggaatatgaacagatccagacccagctgaag
cagagcgcgatgcgcgtcgaaccgatcggtttcgtgtctccggacatgttgcgatcgcgg
gaacggcaatcttaa

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