Sphingobium sp. MI1205: K663_18861
Help
Entry
K663_18861 CDS
T04383
Name
(GenBank) rhizobiocin secretion protein rspD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K663_18861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spmi02000
]
K663_18861
02044 Secretion system [BR:
spmi02044
]
K663_18861
Transporters [BR:
spmi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K663_18861
Secretion system [BR:
spmi02044
]
Type I secretion system
Multiple protein transporter
K663_18861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
nSTAND1
AAA_21
AAA_29
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AMK20133
UniProt:
A0A126RCU2
LinkDB
All DBs
Position
2:493951..495696
Genome browser
AA seq
581 aa
AA seq
DB search
MASAFGERDSELLEVVSNYKKVFIVVLCVSAALNVLLLGGSLYMMMVYDSVLPSHSIPTL
AGLMILVMIVYLFQGFFENMRAGMLADVANSVERELSGRVQNAMSQLALAGRKMPGDGLS
PMHDLENVRAFMSNGVATLLDLPWVIFFLAILSILHIWLGITALVGAIILFSLTLFTNRA
MKRPAEQLLQLSAYRNGAAESNLRHVELLTALGMAGRMQQRWDRLNALYTAAQNKLARSG
TALGGLSKILRLALQSIILTVGALLVIEGKSSAGVIFAASVLSARALAPVDQAIANWKSL
ISARVGWMRLTEMLKCVPATAGVSLRLPAPVQKLEVEKLVVAPPGTRQITVNGVELRLNA
GDACAVIGPSGAGKSSLGRALVGAWRPSRGTIRLDGATQDQWDPEHFGEFIGYLPQTIEL
LDGTIAENIARFDPSATSEAIVAAARVAAVHDLITGLPQGYDTRVGADGQALSGGQRQRI
GLARALYKDPFFVLLDEPNSNLDSEGEAALVAAIASVRERGGIVVVISHRALGQVSHVLL
MREGRMEIFGPAAEVMTRLRHRKNVPRENVVAMQATATGTA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgcgttcggcgaacgtgacagcgaattgttggaagttgtcagcaactacaag
aaagtgttcattgttgtcctgtgcgtcagcgcagcgctcaacgtgctgctgctgggcgga
tccctttacatgatgatggtttatgattcggttctgccgagtcattccatcccgacattg
gccgggctgatgatcctggtgatgatcgtgtacctgttccagggcttcttcgaaaatatg
cgggcaggcatgttggcggatgttgcaaattccgtcgaacgtgaactgtccggcagggtc
cagaacgcgatgtcccaattggcgctggccggacggaagatgcccggtgatgggctcagc
cccatgcacgatctcgaaaacgtccgcgccttcatgtcgaacggggtcgcgaccctgctc
gatctgccttgggtcatcttctttctggccatattgtccatactgcatatctggctgggc
atcacggcgctggtgggcgcgatcatcctgttttccctgacgctgttcacgaaccgggcc
atgaaacggccagccgaacagcttttgcagctttccgcctatcgcaatggcgcggcggaa
agcaatttgcgtcatgtggaactgctgacggcgctcggcatggccgggcgcatgcagcag
cgctgggaccggctgaacgccctgtacaccgccgctcagaacaagctggcgcgctctggc
actgcgcttggcggcctgagcaagatattgcggctggcgcttcagtcgatcatcctgacc
gtcggcgcgctgctggtcatcgaagggaagtcaagcgccggggtcatcttcgccgcatcc
gtcctgtccgcacgcgcgctcgcgccagtcgatcaggcgatcgcgaactggaagagcctg
atcagcgcacgcgttggatggatgcgcctgacggagatgttgaaatgtgtcccggcaacg
gcgggcgtttcgctgcgtttgcctgcgccggtacagaagctggaagtggaaaagctggtc
gtcgcgccgcccggcacgcggcagattaccgtcaacggcgtggagctccgcctgaatgca
ggagacgcctgcgccgtcatcggtccaagcggtgcgggaaaatcatcgctgggccgcgcc
ttggtcggagcctggcgaccgtcacgcgggacgatccgtctcgacggcgcgacgcaggac
cagtgggatcccgaacatttcggcgaatttatcggctatctgcctcagactatcgaactg
ctggacggcaccatcgcggaaaatatcgcgcgtttcgatccttccgcgacatcggaagcg
atcgtcgcggcggcaagggttgccgcggtgcacgacctgatcaccggcctcccgcaaggc
tatgacacccgcgtcggcgcagatggccaagcgctttcgggagggcagcggcagcgcatc
ggcttggctcgcgccttgtacaaggatccgttcttcgtcctgctcgacgagcccaattcc
aatcttgacagcgagggggaggctgcactggtcgccgcgatcgcatcggtgcgcgagcgc
ggaggtatcgtggtcgtgatttctcaccgggcgctggggcaggtcagccatgtcctgctg
atgcgagagggtcgcatggaaatattcggtccggctgcggaagtcatgacgcgcttacga
catagaaaaaatgtgccccgggaaaatgtcgtggcgatgcaagccaccgctactggaaca
gcgtga
DBGET
integrated database retrieval system
