Sphingomonas sp. MS122: ACO227_06020
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Entry
ACO227_06020 CDS
T11466
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spms Sphingomonas sp. MS122
Pathway
spms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACO227_06020 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spms03019
]
ACO227_06020 (pnp)
03016 Transfer RNA biogenesis [BR:
spms03016
]
ACO227_06020 (pnp)
Enzymes [BR:
spms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACO227_06020 (pnp)
Messenger RNA biogenesis [BR:
spms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACO227_06020 (pnp)
Transfer RNA biogenesis [BR:
spms03016
]
Prokaryotic type
tRNA degradation factors
ACO227_06020 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRE11398
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Position
complement(1274172..1276532)
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AA seq
786 aa
AA seq
DB search
MFDKKTVSIEWGGQTLTLETGKVARQADGAIMATLGETVVLCAVTAAKTVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINAIAQVLSY
DGENEPDILAMVAASAALTISGVPFMGPIGAARVGYLNGEYILNPTDEQVAQGDLDLVVA
ATYDAVMMVESEANELSEEIMLGAVLFAHDACREVIKAIVKLAEQAAKEPWELAKVEDKS
ATMKKLKDAIGKDLAAAYKLTNKSARQDAINEARTKARDLFADLKESDPAQYLGTLKLVK
KLEADIVRGAILKDGIRIDGRTTTQIRPIVAETHFLPRAHGSALFTRGETQTIATATLGT
KDAEQMIDGLNGLSYQHFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPTK
EEFPYTIRLTSDITESNGSSSMASVCGGSLAMMDAGVPIKRPVSGIAMGLILEGKDFAIL
SDILGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITKEIFEAALKQAKDGRAHILGEMN
KALGEVRSELSAHAPRIETMQIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGVIKIS
SSDVSQIEAAMNWIKGIVEEPEVGKIYTGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNER
VEKVSDVLSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGAELEDTRPAREPRERGERGDR
EGRGDRRREGGRGGRDGDRGPRREGGDRDRGPRGERGDRPRRERSESKDEGGEDIGLPAF
LTGGDD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaagaagaccgtatcgatcgagtggggcggacagaccctgacactcgaaacg
ggcaaggttgcccgccaggccgacggcgccatcatggcgacgctcggcgagaccgtggtg
ctgtgcgccgtcaccgccgcgaagaccgtgaaggaagggcaggacttcttcccgctcacc
gtccattaccaggagaagtattcggccgcgggacgcatccccggcggcttcttcaagcgc
gagcgcggcgccaccgagaaggagactctggtctcgcgtctcatcgaccgcccgatccgc
ccgctgttcccggagggcttctacaacgagatcaacgccatcgctcaggtgctgagctat
gacggcgagaacgagccggacatcctcgcgatggtcgcggcgtcggcggcgctcacgatt
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggttatctcaacggcgag
tatatcctcaacccgaccgacgagcaggttgcgcagggcgacctcgacctcgtcgtcgcc
gccacctacgacgcggtgatgatggtcgaatccgaagccaatgagctgtcggaagagatc
atgctcggcgcggtgctgttcgcacacgacgcctgccgcgaggtaatcaaggcgatcgtc
aagctcgcggagcaggccgccaaggagccgtgggagctggccaaggtcgaggacaagtcc
gcgaccatgaagaagctcaaggatgcgatcggcaaggacctcgccgccgcgtacaagctg
accaacaagtcggcccgccaggacgcgatcaacgaggcgcggaccaaggcgcgcgacctg
ttcgctgacctcaaggaaagcgatcccgcccagtatctcggcacgctcaagctggtgaag
aagctcgaggccgacatcgtccgcggcgcgatcctcaaggacggcatccgcatcgacggc
cgcacgaccacgcagatccgcccgatcgtggcggagacgcacttcctcccgcgtgcgcat
ggctcggcgctgttcacccgcggcgagacccagaccatcgccaccgccacgctcggcacc
aaggacgccgagcagatgatcgatggcctgaacgggctcagctaccagcatttcatgctg
cactataacttcccgccctattcggtcggtgaagtcggccgcttcggcgcgccgggccgc
cgcgaggtgggtcatggcaagctggcgtggcgcgcgctgcacccggtgctgccgaccaag
gaggagtttccctacacgatccgcctgaccagcgacatcaccgagtccaacggctcgtcg
tcgatggcgtcggtatgcggcggcagcctcgcgatgatggacgccggcgtgccgatcaag
cgcccggtctcgggcatcgcgatgggcctgatcctcgagggcaaggatttcgcgatcctc
tcagacattctcggtgacgaagatcacctcggcgacatggacttcaaggtggcgggcacg
tccgagggcatcacgacgatgcagatggacatcaagatcgccggcattaccaaggagatc
ttcgaggcggcgctcaagcaggccaaggacggccgtgcgcacatcctcggcgagatgaac
aaggcgctgggcgaggtccgttcggagctgtcggcgcacgcgccgcgcatcgagacgatg
cagatcgacaagtcgaagatccgcgacgtgatcggcaccggcggcaaggtgatccgcgag
atcgtcgccaccaccggcgccaaggtcgacatcgacgacgagggcgtgatcaagatcagc
tcgtcggacgtgtcgcagatcgaagccgcgatgaactggatcaagggcatcgtcgaggag
cccgaggtcggcaagatctacaccggcaaggtcgtcaacctcgtcgatttcggcgcgttc
gtgaacttcatgggcggcaaggacggcctcgtccacgtctccgagatcaagaacgagcgc
gtcgagaaggtctcggacgtcctgagcgaaggccaggaagtcaaggtcaaggtgctcgag
atcgaccagcgcggcaaggtccgcctgtcgatgcgcgtcgtcgaccaggagaccggcgcc
gagctcgaggacacgcggcccgcgcgcgagccgcgtgagcgtggcgaacgtggcgatcgg
gaaggtcgcggcgaccgtcgccgtgagggcggccgtggcggccgcgacggcgaccgtggt
ccgcgccgcgaaggtggtgaccgcgatcgcggcccgcgcggtgaacggggcgatcgtcct
cgccgtgagcgctccgagagcaaggacgaaggcggcgaggacatcggcctcccggcgttc
ctgaccggcggagacgactga
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