Sphingomonas sp. MS122: ACO227_06530
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Entry
ACO227_06530 CDS
T11466
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spms Sphingomonas sp. MS122
Pathway
spms03030
DNA replication
spms03430
Mismatch repair
spms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACO227_06530 (dnaQ)
03430 Mismatch repair
ACO227_06530 (dnaQ)
03440 Homologous recombination
ACO227_06530 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spms03032
]
ACO227_06530 (dnaQ)
03400 DNA repair and recombination proteins [BR:
spms03400
]
ACO227_06530 (dnaQ)
Enzymes [BR:
spms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACO227_06530 (dnaQ)
DNA replication proteins [BR:
spms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACO227_06530 (dnaQ)
DNA repair and recombination proteins [BR:
spms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACO227_06530 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XRE11495
LinkDB
All DBs
Position
complement(1363442..1364131)
Genome browser
AA seq
229 aa
AA seq
DB search
MREIVFDTETTGLSFSAGHRLVEIGCVELVNRVPTGRSFHRYLNPDRDMPAEAFAVHGLS
AAFLADKPRFPEVCDELIEFLGDCPLIAHNAMFDYGFINGELGACGKPLLQVERIVDTLA
LARARHPGAKHTLDALCVRYGIDLSARELHGALLDAQLLAQVFIELTGGRQITLGLAVET
VASERIEIAAVRSNARPARVFAPSDEELARHSAFMAGFEEPLWGTPGSG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaatcgttttcgataccgaaacgaccgggctcagcttcagcgcagggcaccgg
ctggtggagatcggctgtgtcgagctggtcaatcgcgtgccgacggggcgcagcttccat
cgctatctcaaccccgatcgcgacatgccggccgaggcgttcgcggtgcatggcctgtcc
gcggcattcctcgccgacaagccgcgcttcccggaggtttgcgacgagctgatcgagttc
ctcggcgactgcccgctgatcgcgcacaacgcgatgttcgattacggcttcatcaacggc
gagctcggcgcatgcggcaagccgctgctccaggtcgaacgcatcgtcgacacgctggcg
ctggcgcgcgcgcggcatccgggcgcaaagcacacgctcgacgcgctgtgcgtgcgctac
ggcatcgacctcagcgcgcgcgagctgcacggcgcgctgctcgacgcgcagctgctggcg
caggtgttcatcgagctcaccggcgggcgccagatcacgctcggcctcgcggtcgagacc
gtggcgagcgaacgcatcgagatcgcggcggtacggagcaatgcccggccggcgcgcgtt
ttcgcaccgagcgatgaagaactggcccgccattcggcgttcatggccgggttcgaggag
cctttatggggcacgccggggtccggttga
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