Sphingomonas sp. MS122: ACO227_06615
Help
Entry
ACO227_06615 CDS
T11466
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spms Sphingomonas sp. MS122
Pathway
spms03030
DNA replication
spms03430
Mismatch repair
spms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACO227_06615 (holA)
03430 Mismatch repair
ACO227_06615 (holA)
03440 Homologous recombination
ACO227_06615 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spms03032
]
ACO227_06615 (holA)
03400 DNA repair and recombination proteins [BR:
spms03400
]
ACO227_06615 (holA)
Enzymes [BR:
spms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACO227_06615 (holA)
DNA replication proteins [BR:
spms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACO227_06615 (holA)
DNA repair and recombination proteins [BR:
spms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACO227_06615 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
XRE11512
LinkDB
All DBs
Position
complement(1378201..1379223)
Genome browser
AA seq
340 aa
AA seq
DB search
MKASEAQIRARLDKPGPDIRLFLLYGPDEAGANDLAARLGRAMGSEAERIDIEGSTLKAN
PGRIAEEAASLSLFGGARYVRISGIDDDSTEAVRLLLDAEVAGNPVVAVGGALKGTGRLL
KLVLAAPAAMAHACYIPDARSAAQLAAGIARENGLRLVGGAAERLAALSGGDRAVLAREI
EKLSIYLDAAPDRPREAGIAALEEIGADLGEAEMHGAIEAVVEGRAAEIGVELARLEHAG
VSAIPLLRQLVRRLMSLAEMRADIDRGASPDEVVKKYRVFFKEEMSTKIALRRWTSPMLA
RAVERVREAERGMTRAGGNAGQVIADEALATLARAAARAR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccagcgaagcgcagatccgcgcgcggctggacaagccggggccggatatccgc
ctgttcctgctctacggccccgacgaggccggcgccaacgatctggccgcgcggctcggc
cgggcgatgggcagcgaggcggagcggatcgatatcgagggatcgacgctcaaggcaaat
ccgggccggatcgccgaggaagcggcgtcgctctcgctgttcggcggcgcacgctatgtc
cggatcagcgggatcgacgacgattcgaccgaagcggtgcggcttctgctcgatgccgag
gtcgcaggcaatccggtggtggcggtcggcggcgcgctcaagggcaccgggcgcctgctc
aagctcgtgctggcggcgcctgcggcgatggcgcatgcctgctacatccccgatgcgcgc
agtgccgcgcagctcgccgcgggaatcgcgcgcgagaatggcctgcggctggtgggcggc
gcggccgagcggctcgcggcgctgtcgggcggcgaccgcgccgtgctggcgcgcgagatc
gaaaagctgtcgatctatctcgacgccgcgccggaccgcccgcgcgaggccgggatcgcg
gcactcgaggagatcggcgccgacctcggcgaagccgagatgcatggcgcgatcgaggcg
gtggtcgaggggcgtgcggccgagatcggcgtcgagctcgcccggctcgaacatgccggc
gtctcggcgatcccgctgctgcgccagctcgtgcgccgcctgatgagcctcgccgagatg
cgcgccgatatcgaccgcggcgcctcgcccgacgaagtggtcaagaaataccgcgtgttc
ttcaaggaagagatgagcaccaagatcgcgctgcgccgctggacgagccccatgctggcc
cgcgcggtcgagcgggtgcgcgaggccgaacgcgggatgacgcgggctggcggaaacgcg
ggacaagtgatcgccgacgaggcgctggcgacgctggcacgcgccgcggcgcgggcacgg
tga
DBGET
integrated database retrieval system
