Sphingomonas sp. MS122: ACO227_07645
Help
Entry
ACO227_07645 CDS
T11466
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spms Sphingomonas sp. MS122
Pathway
spms03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACO227_07645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spms03400
]
ACO227_07645
DNA repair and recombination proteins [BR:
spms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ACO227_07645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ustilago_mating
Motif
Other DBs
NCBI-ProteinID:
XRE11708
LinkDB
All DBs
Position
1581304..1582197
Genome browser
AA seq
297 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYSATKSGAQIAFHQVHEPSGKRIKYEKVVPGIGPVDTD
EIMKGFEYEKGEYVLLDQEEIEAVKLESKKTLELTQFVEADEIDVLYYEKPYFVVPADDL
AEEAFVVLREALKRTRKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDIEPDAELLGLAESLIEKKAAKFDPREFHNRYVEALEKLIDRKRKQKSNRLIIEDKD
EGDGKRGSNVVDLMAALKKSLEKPGGGGSRVSAAKKPAARATTRKAPAKKTATRKRA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgagcctattggcaggggcagatccgcctcgcgctcgtctcgatcccggtc
gagatctactcggcgaccaaatcgggcgcgcagatcgccttccaccaggtgcacgagccg
tcgggcaagcggatcaagtacgagaaggtcgtgcccggcatcggcccggtcgacaccgac
gagatcatgaagggcttcgagtacgagaagggcgagtatgtcctgctcgaccaggaggag
atcgaggcggtcaagctcgagtccaagaagacgctcgagctgacccagttcgtcgaggcc
gacgagatcgacgtgctctattacgaaaagccctatttcgtggtccccgccgacgatctc
gccgaagaggcgttcgtggtgttgcgcgaggcgctgaagcgcacgcgcaaggtcggcctc
ggccagctcgcgatgcgcgggcgcgaatatgtcgtgagtctgaaaccctgcgggcgcggc
atggtactggagacgctgcgctatgccgacgaggtcaacaaggcgcagggctatttccgc
gacatccccgatatcgagcccgatgccgagctgctcggcctcgccgaatcgctgatcgag
aagaaggcggccaagttcgatcccagggaattccacaaccgctatgtcgaggcgctcgag
aagctgatcgaccgcaagcgcaagcagaagtcgaaccgcctgatcatcgaggacaaggac
gagggcgacggcaagcgtggctcgaacgtcgtcgacctgatggcggcgctcaagaagagc
ctggagaagcccggcggcggcggctcgcgcgtctcggccgccaagaaaccggccgcccgg
gcgaccacgcgcaaggcgccggcgaagaagaccgcgacgcgcaagcgggcttga
DBGET
integrated database retrieval system
