Sphingomonas sp. MS122: ACO227_14250
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Entry
ACO227_14250 CDS
T11466
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spms Sphingomonas sp. MS122
Pathway
spms03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spms00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACO227_14250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spms03021
]
ACO227_14250
03400 DNA repair and recombination proteins [BR:
spms03400
]
ACO227_14250
Enzymes [BR:
spms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACO227_14250
Transcription machinery [BR:
spms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACO227_14250
DNA repair and recombination proteins [BR:
spms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACO227_14250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
XRE09243
LinkDB
All DBs
Position
2944001..2945062
Genome browser
AA seq
353 aa
AA seq
DB search
MSVNAKNWQELKKPNGLEKKGGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDLVLNVKQIALKMQGEGAKRLQLSATGPAEVKAGDIA
VSGDIEVMNPELVLCHLDDGATLNMELTADTGKGYVPAAANRPADAPIGLIPVDALYSPV
RQVSYKVENTRVGQELDYDKLSLSIETDGTVTPEDALAYAARILQDQLALFVHFDDSAIT
RSAPIGVAAPAAAEAGAGDTATINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaatgcaaagaactggcaggaactgaagaagccgaacggccttgagaaaaag
ggcggtgacggcaagcgcaaggcgaccttcgtcgccgagccgctggagcgcggtttcggc
ctgacgctcggcaacgcgctgcgccgcgtgctgctctcgtcgctgcagggcgccgcggtc
acctcgatcaagatcgagaatgtgctgcacgagttctcgagcctcgccggcgtgcgcgag
gacgtgaccgacctcgtgctcaacgtgaagcagatcgcgctcaagatgcagggcgagggc
gccaagcgcctccagctcagcgccaccggcccggccgaggtcaaggccggcgacatcgcc
gtgtcgggcgacatcgaggtgatgaaccccgagctggtgctgtgccacctcgacgacggc
gcgacgctcaacatggagctgaccgcggacaccggcaagggttacgtccccgccgccgcc
aaccgcccggccgatgcgccgatcggcctgatcccggtcgacgcgctctactcgccggtc
cgccaggtgagctacaaggtcgagaacacccgcgtcgggcaggagctcgattacgacaag
ctcagcctgtcgatcgagaccgacggcaccgtgacccccgaggacgcgctcgcctatgcc
gcgcgcatcctgcaggaccagctggcgctgttcgtccatttcgacgattcggcgatcacg
cgttcggctccgatcggcgttgccgcgccggcggcggcggaagcgggcgcgggcgacacc
gcgacgatcaaccgctacctgctcaagaaggtcgacgagctcgagctgtcggtgcgttcg
gccaactgcctcaagaacgacaacatcatctatatcggcgacctggtccaaaagaccgag
gccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtg
ctgtcgagcatgggcctgcgcctcggcatggaaatcccaggctggccgcctgagaacatc
gaagagatggccaagaagctcgagcaggagatcatgggctga
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